Arvicanthis niloticus (African grass rat): 117718565
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Entry
117718565 CDS
T08817
Symbol
Hnrnpa1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03040
Spliceosome
anu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117718565 (Hnrnpa1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117718565 (Hnrnpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117718565 (Hnrnpa1)
03041 Spliceosome [BR:
anu03041
]
117718565 (Hnrnpa1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117718565 (Hnrnpa1)
mRNA cycle factors
Common to processing body (P body) and stress granule
117718565 (Hnrnpa1)
Spliceosome [BR:
anu03041
]
Common components
Common spliceosomal components
hnRNP proteins
117718565 (Hnrnpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117718565
NCBI-ProteinID:
XP_034372183
LinkDB
All DBs
Position
13:77463285..77469719
Genome browser
AA seq
373 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGS
GDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGGGFG
GGSGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGG
SSSSSSYGSGRRF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcagagtctcccaaggagccggaacagctgcggaagctcttcatcggaggc
ctgagcttcgaaacaaccgatgagagtctgaggagccattttgagcaatggggaacacta
accgactgcgtggtaatgagagatccaaacaccaagagatccaggggctttgggtttgtc
acatacgccactgtggaggaagtggatgctgccatgaatgcaagaccacacaaggtggat
ggaagagtcgtggaacctaagagggctgtgtcaagagaagattctcagagaccaggtgcc
cacttaactgtgaaaaagatctttgttggtggtattaaagaagacactgaagaacatcac
ctccgagattattttgagcagtatgggaaaattgaagtaatagaaattatgactgataga
ggcagtggaaaaaagagaggctttgcttttgtcacctttgatgaccatgactctgtggat
aagattgttattcagaaataccatactgtgaatggccacaactgtgaagtaagaaaggct
ctgtcaaagcaagagatggctagtgcttcatccagccagagaggtcgaagtggttccgga
aactttggtggtggtcgtggaggcggttttggtggcaatgacaattttggtcgaggaggg
aacttcagtggtcgtggtggctttggtggcagccgtggtggtggtggatatggtggcagt
ggggatggctataatggatttggcaatgatggtggttatggaggaggcggccctggttac
tctggaggaagcagaggctatggaagtggtggacagggttatggaaaccagggcagtggc
tatggcgggagtggcagctatgacagctataacaacggaggaggcggaggcggctttggc
ggtggtagtggaagcaattttggaggtggtggaagctacaatgattttggcaattacaac
aatcagtcttcaaattttggaccgatgaagggagggaactttggaggcaggagctctggc
ccttatggtggcggaggccagtactttgctaaaccacgaaaccaaggtggctatggaggt
tccagcagcagcagtagctatggcagtggcaggaggttctaa
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