Arvicanthis niloticus (African grass rat): 117718573
Help
Entry
117718573 CDS
T08817
Symbol
Arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03082
ATP-dependent chromatin remodeling
anu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117718573 (Arid2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
117718573 (Arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117718573 (Arid2)
03021 Transcription machinery [BR:
anu03021
]
117718573 (Arid2)
03036 Chromosome and associated proteins [BR:
anu03036
]
117718573 (Arid2)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
ARID
117718573 (Arid2)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117718573 (Arid2)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
117718573 (Arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
117718573
NCBI-ProteinID:
XP_034372200
LinkDB
All DBs
Position
13:70605104..70730081
Genome browser
AA seq
1845 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEDFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWREKTDRDFVKFWKDI
VDDNEVRDLISDRNKAHEDTPGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
SNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVTSTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
IRPQAIEQVQTQTHAASGPASRAVVAQHAAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSNNSGQAHIHVIGVK
RRALPLPIQMYYQQQPLSTPVVRVDAVADVSPTPSPAGIPHGSQAVGNHFQRTPVTNQSS
NLTATQMSFPVQGVHTVAQTVSRIPPNPSVHTHQQQNSPVTVIQNKAPIPCEVVKATVIQ
NSVPQTAVPVSIAVGGGPAQSSVVQNHGAGPQPVTVVNSQTLLHHPSVMTQPSPLHTVVP
GQIPSGTPVTVIQQTVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPMHTSSQQTAAGS
QPQDTVIIAPPQYVTTSASNIVSATSVQNFQVAAGQVVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSAAVGQQPIQQPQPPAQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTLQSQGPPPTVSQMLSVKRQQQQQHSPA
PPAAQQVQVQVQQPQQVQVQVQPQQTSAGVAQPASNESSLIKQLLLPKRGPSTPGGKLIL
PAPQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSAMPPTGG
VQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNAAQLIAPA
GISMSGAQAGAGLQVQTLPAGQSACTTATPPFKGDKIICQKEEEAKEATGLHVHERKIEV
MENPSCRRGTTNTSNGDTSESEVQVGSLLNGRKYSDSSLPPSNSGKTQSETNQCSLISNG
PSLELGENGASGKQNSEPVDMQDIKSDLKKTLVNGICDFDKGDGSHLSKNIPNHKTSNHV
GNGEISPGEPQGTSDATQQDTAKGDQLERVSNGPVLTLGGSPTTSSMQEASSVAIQPFSG
TDLPNGPLASSLNSDVPQQRPSVVVSPHSTAPVIQGHQVIAVPHSGPRVTPSALSSDARS
TNGTAECKTVKRPAEDNDRDTVPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTV
AKVAIESAAQQKQQQQQQQQQQQQQHHHHHHPPSYVQSAGPQNTPMPPSPAVQAQSQPGS
SQPSPVSASSQHADPVRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLW
EGCEPFQRQRFSFITHLQDKHCSKDALLAGLKQDEPGQVANQKSSTKQPAVGGPGSAPRA
QKAIASHPSAALMALRRGSRSLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRL
LKRHENNLSVLAISNMEASSTLAKCLYELNFTVQSKEQEKDSEML
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggaggaagggactggctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccgtttaagaagatccctgcggtg
ggtgggaaggagctggatcttcacgggctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagagattgttgaagacttcaactttcccaga
agttgttctaacgcggcctttgctttaaaacagtattacttgcgttatctagaaaagtac
gagaaagttcatcattttggggaagatgatgatgaggtaccaccaggcaatccaaagcca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcagat
tatctacgtcaaagttatgggttatctatggattttaattcgccaaatgattataataaa
ctggtgctttcactgttgtctggactcccaaacgaagtggacttcgctattaatgtgtgc
actctcctgtcaaacgaaagcaagcacgtcatgcagctggaaaaagaccccaaaatcatc
acgttgttactcgctaatgcaggggtatttgacgacactttaggatcattctctactgtc
tttggagaagaatggcgagagaagactgatagagactttgttaagttttggaaagacatt
gttgatgacaatgaagtgcgagacctcatttctgacagaaacaaagctcatgaagataca
ccaggagaatggatttgggaatctttatttcatccacctcgaaagctgggcattaatgac
atcgaaggacagcgggttcttcagattgcagtgattttgcgaaacctttcctttgaagag
agcaatgttaagctcttggcagctaatcgcacctgtcttcgtttcctgttactctctgca
catagtcattttatttcattaaggcaattaggccttgacacgttaggaaatattgcagct
gagcttttactggaccctgttgatttcaagaccactcatctaatgtttcatactgttaca
aaatgcctgatgtcaagggataggtttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagcagaggataatggtgttttgatttgtgaatatgtggatcaggattcatac
agagaaatcatttgtcacctcactttgcccgacgtgctgcttgtaacctcgacactagag
gtgctgtacatgctcaccgagatgggcgacgtcgcctgcaccaagattgcaaaagtagaa
aagagcatagacatgctggtgtgtctggtctctatggacattcagatgttcggccctgac
gcactagctgcagtgaagcttgtggaacatccaagctccagtcaccaagttttatctgaa
attaggccacaagctatagagcaggtccaaacccagacccacgcagcatctggtccagct
tccagagcagttgtagcacagcatgctgctccccctccaggaatcgtggaaatagacagt
gagaagttcgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttcagtc
tctcgggcagagatgtattcagaatatctctcaacttgtagtaaattagctcgtggtggt
atcctcacatcaactgggttttacaagtgtcttagaacagtttttccaaatcacacagtg
aagagagtggaagattccaataacagtgggcaggcacatatccatgtcataggagtgaag
cggagggcactcccgctccccatccagatgtactatcagcagcagccgctgtccacgcct
gttgtccgtgttgatgctgtcgctgacgtgtctccaactccttcacctgcaggaatccct
cacggatcacaagctgtaggaaatcattttcagagaactcctgtcaccaatcagtcttca
aatttgactgcaacacaaatgtcttttccagtacaaggcgttcatactgtggcacagact
gtttctagaattccaccaaatccttcagttcatacccaccagcaacaaaattctccagtg
actgtcattcagaataaagctccaattccttgtgaagtcgttaaggcaacagtaatccag
aactctgtgccccaaacagcagttcctgtgagtattgctgttggaggaggacctgcacag
agttctgtggttcagaatcacggcgcagggccacagcctgttacagttgtaaattctcag
acattgcttcaccatccctctgtgatgacacagccatctccactacacacagtggtgcca
ggacagatcccttcaggcactcctgtcacggtgatccagcagactgtaccacagagtcat
atatttggacgagtacagaacataccagcatgtacgtccacagtttcacagggtcaacag
ttaatcaccacatcaccacaacctatgcacacttcatctcaacagacagcagctggtagc
cagccccaagacactgttatcatagcccccccacagtacgtaacaacttctgcatctaat
atcgtctcagcaacttcagtacagaatttccaggtagctgctgggcaggtggttaccata
gctggtgttccaagtccacagccctcccgggtaggattccagaacattgcacccaagccg
ctgccctctcagcaagtgtcagcagcagtgggacagcagcctattcaacagccacagccg
ccagcccagcagagtgtagtgattgtgagccagccagctcaacaagggcagacttatgca
ccagccatccaccaaatcgttcttgctaacccggcagctctcccagctggtcagacagtt
cagctaactggacaaccaaatataactccatcttcttcgccatcacctgtcccggctact
aataaccaagtccctactgccatgtcatcttcttccacccttcagtcacagggaccacct
cctactgtcagtcagatgctgtctgtgaagaggcagcagcagcagcagcattcaccagca
ccgccagcagcacagcaggtccaggtacaagttcagcagccacagcaagtacaggtacag
gttcagcctcagcagacaagtgcaggggttgctcagcctgcttccaacgagtctagtctg
ataaaacagctgctgcttccaaagcggggtccttcaaccccagggggtaagcttatcctc
ccagccccacagattcctccccctaacaatgcaagagctcctagccctcaggtggtctat
caggtggccaataaccaagcagctggttttggagtgcaggggcaaactccagctcagcag
ctattggttgggcagcaaaatgttcagttggtccaaagtgcaatgccacccaccggggga
gtgcaaaccgtgcccatttcgaacttacaaatattgccaggtccactgatctcaaatagc
ccagcaaccattttccaagggacttctggcaaccaggtaactataacagttgtgccaaat
accagttttgcaactgcgactgtgagtcagggaaacgcagctcagctcattgctccagcc
ggtattagcatgagtggagctcaggcaggagctggacttcaggtgcagacgcttccagcc
ggacaatcagcgtgtaccactgctacccccccattcaaaggcgataagataatttgccaa
aaggaggaggaagcaaaggaagcaacaggtctacatgttcatgaacggaaaattgaggtc
atggagaatccttcctgccgacgaggaaccacaaacaccagcaatggggacacaagtgaa
agtgaagtccaggtggggagtcttttaaatgggagaaagtatagtgactcaagtctacct
ccttcaaactcagggaaaactcagagtgagactaaccagtgctcactaatcagcaatggg
ccatcgttggaattaggtgagaatggagcatctggaaaacagaactcagaaccagtggac
atgcaggatatcaaaagtgatctgaaaaaaaccctcgttaatggaatctgtgattttgat
aaaggagatggttctcatttaagcaaaaacattccaaatcacaaaacttctaatcatgta
ggaaacggtgagatatctccaggagaaccgcaagggacttcggatgccactcagcaagat
actgccaaaggtgaccaactagaaagagtttctaatggacctgtgttaactctgggtggg
tcaccgaccacaagcagtatgcaagaagcttcgagtgtggcaatacagccgttcagtggt
actgacttgcctaatggacctctagcttcaagtttgaattcagatgtgcctcagcaacgc
ccaagtgtagttgtctcaccacattctacagcccctgtcatacaggggcatcaagtcata
gcagttccccactcaggacctagagtgaccccttctgctctatcatctgatgctcggtct
acaaacggcacagccgagtgcaaaactgtaaagaggccggcagaggataatgatagggac
accgtcccgggaattccaaataaagtaggggttagaattgttacaatcagtgaccccaac
aatgctggctgtagcgcaaccatggttgcggtcccagcaggagcggatccaagcactgta
gctaaagtagcaatagaaagtgctgctcagcaaaagcagcagcagcagcagcagcagcag
cagcagcagcagcagcaccaccaccaccaccacccaccgagctatgtccagagtgcgggc
ccacagaacactcctatgccaccttcaccagctgtacaagctcagagccagcctggcagt
tctcagccttctccagtcagtgcatccagtcagcatgcagatccagtgagaaaacctggg
cagaacttcatgtgtctgtggcagtcttgtaaaaagtggtttcagacaccctcgcaagtg
ttctatcatgcagctactgagcatggaggaaaagatgtgtatccggggcagtgtctttgg
gaaggctgtgagcctttccagcggcagagattctccttcattacccacttacaggataag
cactgttcaaaggatgctctgcttgcaggattaaaacaagatgaaccaggacaagtggca
aatcaaaaatcttctaccaagcagcctgctgtggggggcccaggctctgctccaagagcc
cagaaggccattgcaagccaccccagtgctgcgctcatggctctgcgtagaggctcaagg
agccttgtcttccgggactttacagatgaaaaagagggaccaataactaaacacatccga
ctaacagctgccttaatattaaaaaatattggtaaatactcagagtgtgggcgcagattg
ttaaagagacatgaaaacaacttatcagtgctagccattagtaacatggaagcttcctct
acccttgccaaatgcctttatgaacttaattttacagttcagagtaaagaacaagaaaaa
gactcagaaatgctgtag
DBGET
integrated database retrieval system
