Arvicanthis niloticus (African grass rat): 117718656
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Entry
117718656 CDS
T08817
Symbol
Lrp12
Name
(RefSeq) low-density lipoprotein receptor-related protein 12 isoform X1
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117718656 (Lrp12)
Membrane trafficking [BR:
anu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117718656 (Lrp12)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
117718656
NCBI-ProteinID:
XP_034372386
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Position
13:complement(18784852..18856644)
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AA seq
858 aa
AA seq
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MARRWSTKESPRRGSAWLLLFLAGVYGNGALAELSENVHISGVSTACGETPEQIRAPSGI
ITSPGWPSDYPAKVNCSWLIRANPGEIITISFQDFDIQGSRRCTLDWLTIETYKNIESYR
ACGSTIPPPYISSQDHVWIRFHSDDSVSRKGFRLAYFSGKSEEPNCACDQFRCGNGKCIP
EAWKCNSMDECGDGSDEEVCAKDAHPPTTTAFQPCAYNQFQCLSRFTKVYTCLPESLKCD
GNIDCLDLGDEIDCDMPTCGQWLKYFYGTFNSPNYPDFYPPGSNCTWLIDTGDHRKVILR
FTDFKLDGTGYGDYVKIYDGLEENPRKLLRVLTAFDSHAPLTVVSSSGQIRVHFCADKVN
AARGFNATYQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDEINCTMCQKEEFPC
SRNGVCYPRSDRCNYQNHCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDSQDDCGDGS
DEENCPVIVPTRVITAAVIGSLICGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEAEL
LRREAPPSYGQLIAQGLIPPVEDFPVCSPNQASVLENLRLAVRSQLGFTSIRLPMTGRSS
NIWNRIFNFARSRHSGSLALVSGDGDEAVPRQSSSRETERSHPHRSLFSVESDDTDTENE
RRDTAGASGGVAAPLPQKVPPATAVEATVGTGGNSSAQSTRGGHADGREVSSVEAPSVSP
ARHQLTSALSRMTQGLRWVRFTLGRSSSTNQNRSPLRQLDTGVSGREDDDDVEMLIPVSD
GASDIDANDCSRPLLDLASDQVQGFRQPHSAGNPGVRTSNRDGPCERCGIVHTAQIPDTC
LEATVKTETSDDEALLLC
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcgctggagcacaaaagagtctccgcggcgagggtcggcgtggctcttgctt
ttcctcgctggggtgtacggaaatggtgctcttgcagaactttctgaaaatgtgcatatt
tcaggagtgtcaactgcttgtggagagactccagaacaaatccgagcaccaagtggaata
atcacgagtccaggctggccttcagactatcctgccaaagtcaactgtagctggctcata
agggcaaacccaggggaaatcattactataagttttcaggattttgatatccaggggtcc
agaagatgcactttggactggctgacaatagaaacatacaagaatattgaaagttacaga
gcttgtgggtccacaattccgcctccgtatatctcttcccaagaccacgtttggatccgg
ttccactcggatgacagtgtgtccaggaaaggcttcaggttggcgtacttttcagggaaa
tctgaggaaccaaactgtgcctgtgatcagttccgttgtggcaatggaaagtgtattcca
gaagcctggaagtgtaacagcatggacgagtgtggagacggttctgacgaggaggtctgt
gccaaagatgctcaccccccaacaacgactgctttccagccctgcgcctacaaccagttc
cagtgtctgtcccgcttcaccaaggtttacacgtgcctccctgagtccttaaagtgtgac
gggaacatcgactgcctggacctaggagacgagattgactgtgacatgccaacgtgcgga
cagtggttaaagtacttctatggcaccttcaattctcccaactaccccgacttttatcct
cctggaagtaactgcacctggctgatagacactggcgatcatcggaaagtcatcttacgg
ttcactgactttaaacttgatggtaccggatatggtgattatgtcaaaatatatgatgga
ctggaggagaatcctcgcaagcttttgcgagtgctaactgcttttgattctcatgctcct
ctgacggtcgtttcttcctctggacagataagggtgcatttctgtgctgacaaagtgaac
gctgcaagaggcttcaatgctacttaccaagttgacggcttctgtttgccatgggaaata
ccctgtgggggcaactgggggtgttacacagagcaacagcgctgtgacgggtactggcat
tgcccaaacggaagggatgaaatcaactgtaccatgtgccaaaaggaagaatttccgtgt
tctcggaatggcgtctgctaccctcgttctgaccggtgcaactaccaaaatcattgtcca
aatggctctgatgaaaaaaactgcttcttttgccagccagggaattttcactgtaagaac
aaccgctgtgtgtttgaaagctgggtgtgtgattcccaggatgactgtggtgacggcagt
gatgaggagaactgcccggttattgtgcccaccagagtcataacagcagccgtcattggg
agcctcatctgtggcctcctacttgtcatcgcattggggtgcacttgcaagctttattct
ctgagaatgtttgaacggaggtcatttgagacccagttgtcccgggtggaggcagagctg
ctgcgaagagaggcccctccctcgtatggacagttgatcgctcagggcctgatcccccca
gtagaagatttccctgtctgttcacctaatcaggcttcggttttagaaaacctgaggcta
gctgttcgatctcagctgggatttacttcaatcaggcttcctatgacaggcagatctagc
aacatttggaatcgtatttttaattttgcaagatcacgtcactcagggtcattggctttg
gtctcaggagatggagatgaggctgtccctaggcagagtagcagcagagaaactgaaagg
agtcaccctcacagaagcctgttctccgtggagtcggatgacacagacacagaaaacgag
agaagggatacagcgggcgcctcgggcggggtagcagcacctttgccccagaaggtccct
cccgcaaccgcagtcgaggccacagtgggaacaggtgggaattcctcggctcagagcacc
cgaggtggccacgcagacggaagggaagtgtcaagtgtggaagcccccagtgtgagccca
gcacgtcaccagctcacaagtgctttaagtcggatgacgcagggcctgcgctgggtacgc
tttacgttaggtcggtcaagctccacaaaccagaaccggagccctttgagacagctggac
accggggtgagtggaagagaagacgacgatgatgtcgagatgctaattcccgtttctgac
ggagcttcagacattgatgccaatgactgctccaggcctcttcttgatcttgcctcagac
caagtacaagggtttagacagccacacagtgcaggaaaccctggagtgagaacaagtaac
cgggacggcccctgcgagcgctgtggcattgtgcacaccgcccagataccagacacttgc
ttagaagcgacagtgaaaaccgaaacgagtgacgacgaggctttgctgctgtgttag
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