Arvicanthis niloticus (African grass rat): 117718729
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Entry
117718729 CDS
T08817
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03040
Spliceosome
anu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117718729
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117718729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117718729
03041 Spliceosome [BR:
anu03041
]
117718729
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117718729
mRNA cycle factors
Common to processing body (P body) and stress granule
117718729
Spliceosome [BR:
anu03041
]
Common components
Common spliceosomal components
hnRNP proteins
117718729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
Nup35_RRM_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
117718729
NCBI-ProteinID:
XP_034372450
LinkDB
All DBs
Position
13:complement(16612061..16627965)
Genome browser
AA seq
379 aa
AA seq
DB search
MEVKPLPGRPQPDSGRRCCCHRGEEGHDPKEPEQLRNLFIGGLSFETTDDSLREHFEKWG
TLTDCVAMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKP
GAHLTVKKIFVGGIKEDTEEYSLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDT
VDEIVVQKYHTINGHNCEVXKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGGGGGNFGR
GGNFGGRGGYGGGGGGSRGSYGGGNGGYNGFGGDGGIYGGGPGYSSRGGYGGGGPGYGNQ
GGRCGGGGGGYDGYSEGGKFGGGNYGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSP
YGGGYGSRGGSGGYGSRRF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaaaccgctgcccggtcgcccccagcctgactccggccgtcgttgctgctgc
cacaggggggaggaaggccatgatccaaaggaaccagagcagctgaggaacctgtttatt
ggtggtctgagctttgaaaccacagatgatagcttaagagaacattttgagaaatggggc
acacttacagactgtgtggcaatgagagatccccaaacaaaacgttccaggggctttggt
tttgtgacctactcttgtgttgaagaggtggatgctgcaatgtgtgctcggccccacaag
gttgatgggcgtgtggtggaaccaaagagagctgtttctagagaggattctgtaaagcct
ggtgcccatttaacggtgaagaaaatttttgttggtggtattaaagaggatacggaagaa
tatagtctgagagactactttgaaaagtatggcaagattgaaaccatagaagttatggaa
gacaggcagagtgggaaaaagagaggatttgcttttgtaacttttgatgatcatgacaca
gttgatgaaattgttgttcagaaataccacactattaatgggcataattgtgaagtgnaa
aaggccctttctaaacaagagatgcagtctgctggatcacagagaggtcgtggaggtgga
tctggcaacttcatgggtcgtggaggaaactttggaggtggtggaggaaactttggtcgt
ggaggaaactttggtggaagaggaggctatggtggtggaggtggtggcagcagaggtagt
tatggaggtggtaatggtggatataatggatttggaggtgatggtggcatctatggtggt
ggtcctggttacagtagtagaggaggttatggaggtggtggaccgggatatggaaaccaa
ggtggtagatgtggtggtggtggaggaggatatgatggttacagtgaaggaggaaagttt
ggtggaggtaactatggtggtgggaactataatgactttggaaattatagtggacagcag
caatcaaattatggacccatgaaagggggcagttttggtggaagaagctcaggcagtccc
tatggtggtggctatggatctagaggtggaagtggtggatatggtagcagaaggttttaa
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