Arvicanthis niloticus (African grass rat): 117718787
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Entry
117718787 CDS
T08817
Symbol
Adamts20
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 20 isoform X1
KO
K09609
a disintegrin and metalloproteinase with thrombospondin motifs 20 [EC:3.4.24.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117718787 (Adamts20)
Peptidases and inhibitors [BR:
anu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
117718787 (Adamts20)
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Motif
Pfam:
TSP1_ADAMTS
GON
TSP_1
ADAMTS_spacer1
Reprolysin
ADAMTS_CR_2
TSP1_spondin
Pep_M12B_propep
TSP1_CCN
Reprolysin_5
ADAMTS_CR_3
Reprolysin_2
Reprolysin_3
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
117718787
NCBI-ProteinID:
XP_034372581
LinkDB
All DBs
Position
13:complement(68650602..68769774)
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AA seq
1906 aa
AA seq
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MRVAKWLTGLLCPISLLLTGSWEVRFHPRQEALVKTLASYEVVTPTRVNEFGDVFPQNRH
FSRKKRSSGVPEPPPLRTHYRISAYGQLFQLNLSADAAFLAAGYTEVHLGTPVPGPGGYS
VDPPDLRHCFYRGQVNEREDHTAVFSLCGGLMGTFRANDGEYFLEPVLRADGSEHEDAHN
KPHLIYRQELKSNSFAQSHGPCEASENQMEKTALPSQNSRNTTRNVNIKDEAGFRLAGER
SPLHSRNKRFLSYPRYVEVMVTADAKMVHHHGQNLQHYVLTLMSIVAAIYKDSSIGNLIN
IVIVKLVVIHSEQEGPVISFNAATTLRNFCLWQQSQNVLDDAHPSHHDTAVLITREDICG
AKEKCDTLGLAELGTLCDPSRSCSISEENGLSAAFTIAHELGHVFNVPHDDSFKCKEAGV
KHQYHVMAPTLNYHTSPWTWSACSQKHITEFLDTGHGECLLDKPNGRTYDLSPQLPGSVY
DGNKQCELMFGPGSQVCPYLKQCRRLWCTSAEGVHKGCRTQHMPLADGTSCGPGMHCHRG
LCVTRDMETRPVDGEWGPWGPYSPCSRTCGGGIKSTARLCDRPEPRNGGRYCVGRRMKFR
SCNTDSCPKGKRDFREKQCSDFDGKHFDINGLPPNVRWLPKYSGIAVKDRCKLYCRVAGT
TSFYQLKDRVADGTPCGTETNDICVQGLCRQAGCDHVLNSKAKRDKCGVCGGDNSSCQTL
AGVFNSAHYGYNVVVKIPAGATNIEILQHSYSGRPEDDNYLALSDTQGNFLLNGNFVVSM
AKKEINIQGAVFEYSGSNNSIERINSTDRLEAELVLQVLCVGNLYNPDVHYSFNIPIEER
SNLFSWDPYGPWQDCTKMCQGLHRRKIACVRKSDHAIVSDQSCGHLPLPLLVTEKCNTDC
ELRWHITGKSDCSSQCGQGYRTLDVHCMKYSVHKGQTVPVGDQYCGDQLKPPTREPCHGS
CVLTRWHYSEWSQCSRSCGSGEKTRESYCVNGFGHRLAERECQELPRVVLGTCNEFPCPS
WATSEWSECPVTCGKGMKQRQVWCQRSEDPVRDGFCNASTKPESLRPCELRACASWHVGP
WGSCTATCGHGYQMRVVKCVSEIFGTVVDDRECPRASQPSDRQECIFAPCLAIPKVGATS
LPAIPLEKAAQWRHGSWTPCSVSCGRGSQARYVSCRDAHDEVAEESNCAHLPRPAAVSLC
FSPCGEWQAGDWSPCSASCGHGKTTRRVLCVNYHQLVDESYCDPEGHPVTEQECSLAACP
PSYGRTPSSSEQPSHVPGRNVPLTHKPGENQDQGVQLSIRGNQWRTGPWGACSRSCSGGL
QHRAVVCQDEDGRSATSCDAASKPPESKHCGSGPCPHWNYGNWGECTQTCGGGVKTRFVI
CQFPNGQMAQEHSCELPKPPSMMQCHLHACPDDVSWYRGPWKSCSASCGKGMKYRDVLCI
DQFQRKLEEKYCSHLHKPRVHKACRSGRCPSWKANKWRECSVTCGSGVQQREVYCRLRGS
GRVSEDMCDPSTRPQVRRQCWHQDCVRYQWTTGDWLDCSTSCKKKETYRLVKCANEQSIQ
VNESLCDPLTKPVSVKKCRNPHCKYMVVTGDSSQCAGNCGFTSPQKITYCTRIQSSKKHA
FHQLWPVGYGECPVMPSPQAYKCDLRSCLRVATWKVGKWSKCSVTCGNGIMERRVACRTE
NGWPSDLCLKRLKPDAQKKCYANDCKLLTTCKEIQVTNNVTKDGDYDLNVRGRILKIHCS
GMQLENPREYLPLVKGEDNFSEIYGLRLQNPYECPFNGSRRPDCACENDYLPAGYTVFSK
VRVDLASMQIKTMDLLFSQTLFGKAVPFATAGDCYSAARCPQGQFSINLAGTGIKISNTA
KWLAQGRYASVIIHRSPDGTKVYGRCGGFCGKCFPHVATGLPIQVL
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtggccaagtggctgaccgggttgctctgcccgatctcgctccttcttaccggg
tcctgggaagttcgtttccacccacgacaggaagccctggtgaagactctggcctcctac
gaagtggtgacccccacgcgggtcaatgagttcggagacgtgttcccccagaaccggcat
ttcagccggaagaaacggagctccggggtgccggagcctcctccgctcaggacccactac
cgtatcagcgcctacggccagctcttccagctgaacctgagcgccgacgcagccttcctg
gctgcaggatacacggaggtgcacttggggaccccggtgcccggaccaggcgggtacagc
gtggatcccccagacctgcgccactgtttctaccgtggccaggtcaacgagcgagaggac
cacactgctgtcttcagtctctgtgggggactgatgggaacattcagagcaaatgatggg
gaatatttcttagaaccggtcctgagggcggatgggagtgagcatgaagatgcccacaac
aagccacatctgatctacagacaggaattaaagagcaactcctttgcgcagtctcacggg
ccttgtgaagcttcagaaaatcaaatggagaaaacagctttgccctctcagaactccagg
aacacgacccgcaacgttaatataaaggacgaagcggggttcagattggcaggtgaacgg
agtccgttacattccaggaataagcgttttttatcgtacccaagatatgtggaagttatg
gttacagccgatgctaagatggttcaccatcatgggcagaatttgcagcactatgtgctg
acactgatgtcaattgttgctgcaatctacaaggattcaagcattgggaaccttataaat
atagtgattgtgaagttagttgtaattcacagtgagcaggaagggccagtgatcagtttt
aatgcagccaccacactacgcaacttttgcttatggcaacagagtcagaatgttctggat
gatgctcacccttcccaccatgacactgctgtcctcatcacgagggaagacatttgtggc
gctaaagagaaatgcgacacattaggcttagcggagctaggcaccctgtgcgatccttca
cggagctgctccattagtgaagagaacgggctgagtgccgccttcaccattgcccatgag
ctcgggcacgtgtttaatgttccccacgatgacagttttaaatgtaaggaagctggggtc
aaacatcagtatcacgtaatggccccaactctaaattaccacacgagcccttggacctgg
tcagcctgcagtcagaagcacatcacggagtttctagacactggccatggagaatgtctt
ctcgacaaacccaatggaagaacgtatgacctgtctccacagctcccgggctctgtatac
gatgggaacaaacagtgcgagctcatgtttggccctgggtcgcaagtgtgtccctatttg
aaacaatgtcggcgcctgtggtgcacgagtgcagaaggtgtccacaagggctgtcgcaca
cagcacatgccgctggcagacgggacgagctgtggtcctgggatgcactgccaccgcggg
ctgtgtgtgaccagggacatggagacccgtcctgtggatggtgaatggggaccatgggga
ccctacagcccgtgttcaagaacctgtggcgggggaatcaagagcacagccaggctctgt
gaccggcccgagccacggaacggaggaaggtactgtgtgggccgcaggatgaaatttcga
tcatgtaatactgattcatgtccaaaaggcaagcgagacttccgagaaaagcaatgctcc
gactttgatggtaaacatttcgacatcaacggcctcccccccaatgtgaggtggcttccg
aagtacagcgggattgccgtaaaagatcgctgtaaactctattgccgggtcgctgggacc
accagcttctaccagctgaaggacagagttgccgatgggacaccctgtgggacagaaact
aatgacatctgtgtccagggcctctgtcggcaagctggctgtgatcatgtactaaactcc
aaggccaagagagacaaatgtggagtgtgtggtggtgataactcttcttgccagaccctg
gcgggtgtcttcaacagtgcacattacggttacaatgttgttgtgaagatccctgcaggg
gctacaaacattgaaattcttcagcacagctattctggaagaccggaagatgacaactat
cttgcattatctgacactcaagggaacttccttctgaatggaaactttgttgtaagtatg
gcaaagaaagagatcaacatccagggtgctgttttcgaatacagtgggtcaaacaactcg
attgagagaattaatagcacagaccggctggaggcggagcttgttctgcaggtgctgtgt
gtgggtaatttatacaaccctgatgtgcactattccttcaacatccccattgaggagagg
agtaatctgttctcctgggatccgtatgggccgtggcaagactgtaccaaaatgtgccaa
ggtcttcacagaagaaaaattgcctgcgttcgtaagagtgatcatgcaattgtatctgat
caaagttgtggccacttaccgctgccactgcttgtgactgaaaagtgcaatacggactgt
gaactcaggtggcacatcactgggaaaagtgactgctcatcccagtgtggccagggatac
aggaccctggacgttcactgcatgaagtattccgttcataaaggacaaactgtcccagta
ggagatcagtactgtggtgaccagctcaaacctcccacccgagagccatgccacggcagc
tgtgttttaacaaggtggcattattcagagtggtcccagtgttctaggagttgtggcagt
ggcgagaagactcgagagtcctactgtgtaaatggctttggccaccgccttgctgaacga
gagtgccaggagcttcctcgggtggtgctggggacctgcaatgaatttccgtgtcccagc
tgggcaacgagtgagtggagtgagtgtcctgtcacatgtggaaaaggaatgaagcagagg
caggtttggtgtcagcggagtgaagaccccgtgagggatggcttctgcaatgccagtacc
aagccggagtccctgagaccctgtgagctccgtgcgtgcgcttcttggcatgtaggacca
tggggttcttgcacagccacctgtggacatggatatcagatgcgtgttgttaagtgtgtc
agtgagatatttggcactgtggtagatgacagagaatgcccaagagccagccagccaagt
gacagacaggaatgcatatttgcaccttgcctggctattccaaaagttggggccacttcc
ttaccagccattcccctggaaaaggcagcacagtggcgccatggatcctggaccccatgc
tctgtgtcctgtggaagaggcagccaggcccgttatgtgagctgccgggatgctcacgat
gaagtggcggaggagtcgaattgtgcccatttacctcgacccgctgccgtatctctctgc
ttcagcccttgtggagagtggcaagcaggggactggtcaccatgttcagcctcctgtgga
catgggaaaaccacccgacgtgttttatgtgtgaactaccatcaactggtcgacgagagt
tactgtgaccccgaaggccatcctgtgactgaacaagaatgtagcctggcggcctgccca
ccctcatacggccgaactcccagctcctctgagcagccaagccacgttccaggcagaaat
gttccattaactcacaagccaggagagaatcaagatcagggggtccagctgtcaatcaga
ggaaaccagtggagaacaggcccttggggagcatgctcccgaagctgctcaggcggtctt
cagcacagagccgtggtctgccaggatgaagatgggcgaagcgctacttcctgtgatgcg
gcctccaagcccccagaatcaaagcactgtggctccggaccttgtccgcactggaattat
gggaactggggagaatgcacacaaacctgtggtggaggggtaaaaacaagatttgtgatc
tgtcagtttcccaatggccaaatggcacaagaacacagctgtgaactgcccaagccacct
agcatgatgcagtgtcacctgcacgcctgccctgatgatgtgtcctggtatcggggacca
tggaaatcgtgctcagcctcttgtggtaaaggtatgaagtaccgcgatgttctttgcatt
gatcaattccaaaggaaattagaagaaaaatattgcagtcacttgcataaacctcgagtt
cacaaagcttgcagatcgggacgatgcccttcatggaaagccaataaatggagggagtgc
tctgtgacctgtgggtcaggggtgcagcaaagggaggtgtactgcagactgagaggctct
ggtcgtgtgtctgaagacatgtgtgatccgtccacccggcctcaagtgcggcggcagtgc
tggcatcaggactgcgtgaggtaccagtggacgacgggagactggctagattgttcaaca
tcgtgtaagaaaaaggagacctatcggctggtgaaatgcgcgaatgaacaaagcatacaa
gtgaatgaaagtctctgtgaccccttaacgaaaccggtttcggtcaaaaagtgcaggaat
cctcactgcaagtacatggtggttacaggagactcatcgcagtgcgcaggtaactgtggg
ttcacttctccacagaagattacatactgcactaggatccagtcctctaagaagcatgca
ttccatcagctttggcctgtaggctatggggagtgtcctgtgatgccttctcctcaggcg
tacaaatgcgaccttagaagctgtctgcgtgtagccacttggaaagtggggaagtggagc
aagtgctcagtaacttgtggaaatgggataatggagagaagagtagcgtgcaggactgag
aacggttggcccagtgacttatgtttaaagcgtttaaagccagatgcccaaaagaaatgt
tatgccaatgactgtaaattacttaccacctgcaaagaaatccaagttacaaacaacgtt
accaaggatggtgactatgaccttaatgtcaggggaagaatattgaagatccattgctca
ggcatgcagctggagaatcctagggaatatttaccactggtcaaaggtgaagacaacttt
tcagaaatctatggccttagacttcaaaatccctatgaatgtcccttcaacggaagcagg
aggccagactgtgcatgtgaaaacgactacctacctgcaggatacactgtatttagcaaa
gtgagagtagatctcgcttccatgcaaatcaaaactatggatcttcttttttcccagaca
ctatttggaaaggcagttccatttgccacagctggagactgctacagtgctgccagatgc
ccacaggggcagttcagcatcaacttagcaggaactgggataaagatatccaacacagcg
aagtggctcgctcaggggaggtatgcctcggtcatcatccacagatccccagacggaacc
aaagtctacggcagatgcggagggttctgtgggaagtgttttcctcacgtggctacgggg
ctcccgattcaagtactatga
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integrated database retrieval system
