Arvicanthis niloticus (African grass rat): 117718885
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Entry
117718885 CDS
T08817
Symbol
Puf60
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117718885 (Puf60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117718885 (Puf60)
Spliceosome [BR:
anu03041
]
Complex A
U2 snRNP components
U2 related factors
117718885 (Puf60)
Complex B
117718885 (Puf60)
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GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
117718885
NCBI-ProteinID:
XP_034372747
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Position
13:complement(51189295..51200056)
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AA seq
563 aa
AA seq
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MATATIALQVNGQQGGGSEPAAAAAAAAAVVAAGDKWKPPQGTESIKMENGQSTGTKLGL
PPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAAVTMGFGDPLSPLQS
MAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVE
YEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQD
LSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY
LRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLATPGLVSP
ALTLAQPLGALPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPK
KEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDID
DDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMASETHKAIQALNGRW
FGGRKVVAEVYDQERFDNSDLSA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgactatagctctccaggtcaatggccaacaaggaggggggtcggagcca
gcagcagcggctgcagcggcggcggcagtggtggcagcaggagacaaatggaaacctcca
cagggcacagaatccatcaagatggaaaatgggcaaagcacaggcaccaagctggggctg
cctcccctgacgcccgaacagcaggaggccctccagaaggccaagaaatatgcaatggag
cagagcatcaagagtgtgctggtgaagcagaccatcgcgcaccagcagcagcagctcacc
aatctgcagatggcagcagtgacaatgggctttggagatcctctctcacctttgcaatcg
atggcagctcagcggcagcgggcactggctatcatgtgccgggtctatgtgggttccatc
tactatgagctgggagaagacactattcgccaggcctttgctccctttggccccatcaag
agcattgatatgtcctgggactccgttaccatgaagcataagggctttgccttcgtggag
tatgaggtcccagaggctgcacagctggctttggagcagatgaactctgtgatgcttggg
ggcagaaacatcaaggtgggaagacctagcaacatcggacaagcccagcctatcatagac
cagctggctgaggaggctagggctttcaaccgaatatatgtggcctctgtacatcaggac
ctgtctgatgatgacatcaagagtgtgtttgaagcctttggcaagatcaagtcttgtacg
ctggcccgggaccccacaaccggcaagcacaagggctatggttttatcgaatatgagaag
gcccagtcgtcccaggatgctgtgtcctccatgaacctctttgatctgggtggccagtac
ttgagggtgggcaaggccgtcacaccccccatgcccctgctaacacctgccacgcctgga
ggtctcccgcctgctgctgctgtggccgcagctgcagccacagccaagattacagctcag
gaagcagtggctggagcagcagtgctgggtactttagccacgccaggactagtttcccca
gcactgacactggcccagcccttaggggccctaccccaggctgtcatggctgcccaggcc
cctggagtcatcacaggtgtgacaccagctcgccctcctattccggtcaccatcccctct
gtgggcgtggtgaaccccatcctagccagcccaccaacactgggtttgttggaacccaag
aaggagaaggaagaggaggagctgtttcctgagtcggagcggcccgagatgttgagtgag
caggagcacatgagcatctctggcagcagtgctcgtcacatggtcatgcagaagctcctc
aggaagcaggagtctacagtgatggttctccgaaacatggtggaccccaaggacatcgat
gatgatctggagggagaggtgacagaggagtgtggcaaatttggtgctgtgaaccgggtc
attatctaccaagaaaaacagggcgaggaggaagatgcagaaatcattgtcaagattttt
gtggaattttccatggcctcagagactcacaaggccatccaggccctcaatgggcgctgg
tttggtggtcgcaaggtggtggctgaagtatatgaccaggagcgttttgataacagcgac
ctctctgcgtga
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