Arvicanthis niloticus (African grass rat): 117718931
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Entry
117718931 CDS
T08817
Symbol
Hoxc11
Name
(RefSeq) homeobox protein Hox-C11
KO
K09296
homeobox protein HoxC/D11
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117718931 (Hoxc11)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
117718931 (Hoxc11)
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GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117718931
NCBI-ProteinID:
XP_034372836
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Position
13:77181711..77185066
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AA seq
304 aa
AA seq
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MFNSVNLGNFCSPSRKERGADFGERGSCTSNLYLPSCTYYVPEFSTVSSFLPQAPSRQIS
YPYSAQVPPVREVSYGLEPSGKWHHRNSYSSCYAAADELMHRECLPPSTVTEILMKNEGS
YGGHHHPSAPHAAPAGFYSSVNKNSVLPQAFDRFFDNAYCGGGDAPSEPPCSGKGEAKGE
PEAPPATGLASRAEAGAEAEAEEENTNPSSSGSSHSATKEPAKGAAPNAPRTRKKRCPYS
KFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDRLQYFSG
NPLL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcggtcaacctgggcaacttctgctcgccttcgcgcaaggagaggggcgct
gacttcggcgagcgagggagctgcacctccaacctctatctgcccagttgcacttactac
gtgcccgagttctccaccgtctcttccttcctgccccaggccccctctcgtcagatttct
tatccctactcagcccaagtgcccccagtccgggaggtctcctacggcctggaaccgtcc
gggaagtggcaccatcggaacagctactcgtcttgttatgcggcggccgacgagcttatg
caccgggagtgcctgcctccttccacagtcactgagatcctcatgaaaaatgaaggttcc
tacggcggccaccaccaccccagcgccccgcacgcggccccagccggcttctactcctca
gtcaacaagaacagcgtcttgccccaagccttcgaccgcttcttcgacaacgcctactgc
ggtggcggagatgcgccctccgagcccccctgctccggcaagggcgaggccaagggggag
cctgaggcgcccccagccacgggacttgcgtcccgggcagaggctggtgctgaggccgag
gccgaggaggagaacacgaatcccagctcatctggttcttcccactcggcgaccaaggag
ccggccaagggagccgcccccaacgccccccgcacccgcaagaagcgctgcccttattcg
aaattccagatccgggaactggagcgagagtttttcttcaacgtgtacatcaacaaagag
aagcggctgcagctgtcccggatgctgaacctgacagaccgacaagtgaaaatttggttt
cagaacagaagaatgaaagaaaaaaaactgagcagagaccggctgcagtatttttcagga
aatccgctgctgtaa
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