Arvicanthis niloticus (African grass rat): 117718943
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Entry
117718943 CDS
T08817
Symbol
Sox10
Name
(RefSeq) transcription factor SOX-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117718943 (Sox10)
Transcription factors [BR:
anu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117718943 (Sox10)
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Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117718943
NCBI-ProteinID:
XP_034372854
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All DBs
Position
13:complement(54234576..54243845)
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AA seq
466 aa
AA seq
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MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD
GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
GKAAQGEAECPGGEAEQGGAAAIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQSHGPPT
PPTTPKTELQSGKADPKRDGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVTELDQY
LPPNGHPGHVGSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQVKTET
TGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHAGQASG
LYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggaacaagacttatcagaggtggagctgagccccgtgggctccgaggaaccc
cgctgcctgtccccgggcagcgcgccgtcgctgggacccgacggcggcggcggtggctca
ggcctgcgagccagcccggggcccggcgaactgggcaaggtcaagaaggaacagcaggac
ggcgaggcggacgatgacaagttccccgtgtgcatccgcgaggcggtcagccaggtgctc
agcggctacgactggacgctggtgcccatgcccgtgcgcgtcaacggtgccagcaagagc
aagccgcacgtcaagcggcccatgaacgccttcatggtgtgggcacaggcggcacgcaga
aagctagccgaccagtacccgcacctccacaatgctgagctcagcaagacgctgggcaag
ctctggaggctgctgaacgagagcgacaagcgccccttcattgaggaggccgagcggctc
cgaatgcagcacaagaaggaccatccggactacaagtaccagcctcggaggcggaagaat
gggaaggcagcccagggggaggcagaatgcccaggcggggaggctgagcaaggaggggct
gctgctatccaggctcactacaagagtgcccacctggaccaccggcacccagaagaaggc
tcccccatgtcagatgggaacccagagcacccctcaggccagagccatggccctcctacc
cctccaaccaccccaaagacagagcttcagtccggcaaggcagaccccaaaagggatggg
cgctccttgggggagggcgggaagccccacatcgacttcggcaacgtggacatcggggag
atcagccacgaggtaatgtccaacatggagacctttgatgtgactgagctggaccaatat
ctgccacccaatgggcacccaggccacgtgggtagctactcagcagctggctatgggctg
ggcagtgccctggctgtggccagtggacactctgcctggatctccaagccaccaggtgtg
gctctgcccacagtctcgccccctggtgtggatgccaaagcccaggtgaagacagagacc
acaggcccccagggacccccacactacaccgaccagccgtcaacctcccagatcgcctac
acctccctcagtctgccccactacggctctgccttcccctccatctctcgcccccagttt
gactactctgaccatcagccctcaggaccctattatggccatgcaggccaggcctctggc
ctctactcagccttttcctacatggggccctctcagcggcccctctacacggccatctct
gaccccagcccctcagggccccaatcccacagtcccacacactgggagcagccagtatat
acgactctatctcgaccttag
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