Arvicanthis niloticus (African grass rat): 117718951
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Entry
117718951 CDS
T08817
Symbol
Samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog
KO
K07277
outer membrane protein insertion porin family
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117718951 (Samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
anu03029
]
117718951 (Samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117718951 (Samm50)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
117718951 (Samm50)
Transporters [BR:
anu02000
]
Other transporters
Pores ion channels [TC:
1
]
117718951 (Samm50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
Motif
Other DBs
NCBI-GeneID:
117718951
NCBI-ProteinID:
XP_034372865
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All DBs
Position
13:58937472..58962000
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AA seq
469 aa
AA seq
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MGTVHARSLEPLPSSGTDFGALGEEAEFVEVEPEAKQEILENKDVVVQHVHFDGLARTKD
DIIICEIGDVFKAKNLIEVMRRSHEAREKLLRLGIFRQVDVLIDTCHGEDALPNGLDVTF
EVTELRRLTGSYNTMVGNNEGSMVLGLKLPNLLGRAEKVTFQFSYGTKETSYGLSFFKPQ
PGNFNRNFSVNLYKVTGQFPWSSLRETDRGVSAEYSFPLWKTSHTVKWEGVWRELGCLSR
TASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKVNQELAGYTGGDVSFIKEDF
ELQLNKPLALDSVFSTSLWGGMLVPIGDKPSSIADRFYLGGPTSVRGFSMHSIGPQSEGD
YLGGEAYWAGGLHLYTPLPFRPGQGGFGELFRTHFFLNAGNLCNLNYGEGPRAHIRKLAE
CIRWSYGAGIVLRLGNIARLELNYCIPMGVQRGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtgcacgcccggagtctggagcccctcccatcaagcggaactgactttgga
gcactgggggaggaagctgagtttgtggaagttgaacctgaagcgaaacaggaaatccta
gaaaacaaagatgtggtggttcagcatgttcattttgatggacttgcacggactaaggat
gacatcatcatttgtgaaattggagatgtttttaaggctaaaaacctcattgaggtaatg
cgacgatctcatgaagcccgggaaaaactgcttcgcctaggaatttttaggcaagtggat
gttttgatcgacacatgtcatggtgaagatgccctgccaaatgggttagatgtcaccttt
gaagtgacggagctgaggagactgacgggcagttacaacaccatggttggaaacaacgaa
ggcagtatggtactcggcctcaaactccccaaccttctgggacgcgcagagaaagtgact
ttccagttctcttatggaaccaaagaaacctcctacggcctgtccttcttcaagccacaa
cctgggaacttcaacagaaatttctccgtaaacttatataaagttactgggcagttcccg
tggagctcacttcgggagacagacagaggagtgtctgccgagtacagttttcccctatgg
aagaccagtcacactgtcaagtgggagggtgtgtggcgggagctgggctgtctctcgagg
actgcatcgtttgctgtgcggaaggaaagtggacactcattgaagtcgtctctctcgcac
gccatggttatcgactctcggaattcatctatcttgccaagaagaggggccttgctcaaa
gtcaaccaggagctggcaggctacactggaggggatgtgagcttcatcaaggaagacttt
gagcttcagctgaataagccgctcgcattggattcggtattctccacgtctctctggggt
ggaatgctggtgcccattggtgacaagccatccagcattgctgacaggttttacctggga
ggccccacgagtgtccgaggatttagcatgcacagcattggaccccagagcgaaggagat
tacctgggcggggaggcatactgggccgggggcctgcacctctacaccccactgcccttc
cggccaggccagggtggcttcggagagcttttcagaactcactttttcctcaatgcgggc
aacctgtgcaacctcaactatggtgagggtcccagagcccacatccggaagctagctgaa
tgcatccgctggtcctatggagcaggcatcgtcctccgacttggcaacatcgctcggctg
gagctgaactactgcattcctatgggcgtgcagcggggcgacaggatttgtgatggcgtc
cagtttggagctgggattcggttcctgtaa
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