Arvicanthis niloticus (African grass rat): 117719050
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Entry
117719050 CDS
T08817
Symbol
Taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117719050 (Taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117719050 (Taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117719050 (Taf2)
03036 Chromosome and associated proteins [BR:
anu03036
]
117719050 (Taf2)
Peptidases and inhibitors [BR:
anu01002
]
Metallo peptidases
Family M1
117719050 (Taf2)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117719050 (Taf2)
Coactivators
SAGA/TFTC/STAGA complex
117719050 (Taf2)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117719050 (Taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
SR-25
Motif
Other DBs
NCBI-GeneID:
117719050
NCBI-ProteinID:
XP_034373015
LinkDB
All DBs
Position
13:complement(31982270..32037937)
Genome browser
AA seq
1197 aa
AA seq
DB search
MPPTGLESARMNRKKDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANLN
RIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHSESKQRNLNYFSNAYAAAVSAVDPDA
GNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSCG
YQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIP
TAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPY
SCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFISR
MSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGGG
KEKDNPASHLHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLAS
TASSQKFQSHMWSQMLVSTYGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKR
NVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKK
KKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYELRYERDVVA
QQESILALEKFPTPASRLALTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMKS
LFTRMFCCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKY
NDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEK
LLPSYRHTITVSCLRAIRVLQKNGHVPSDASLFKSYAEYGHFVDIRIAALEAVVDYTKVD
RSYEELQWLLNMIQTDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGT
AHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEAGVGNQDSA
SNPGCHAQLAGFQNPFSGSQDEEEVDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPSSS
RSSLMPQHSLGSDVTPAPKPQWSMELTRKGAGKEQPLEMGMHSMVAAPLSVFAKESLSSR
HSEHHHHHHHEHKKKKKKHKHKHKHKHKHDSKDKDKEPFAFSSPASGRSVRSPSLSD
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaccggcttagagtccgccaggatgaacaggaagaaagacaagggcttcgaa
agcccacggccgtacaaattaacccatcaggtcgtctgtatcaacaacataaacttccag
agaaaatctgttgtgggatttgtggagctgactatatttcctacagttgcaaacttgaat
agaatcaagttgaacagtaaacagtgtagaatataccgagtcaggatcaatgacttggag
gctgcttttatttataatgatccaaccttagaagtttgtcacagtgaatcaaaacagaga
aacctcaattatttttccaatgcctatgcagctgcagtcagcgctgtggaccctgatgcg
gggaatggagaactgtgcattaaggttccctcagagctctggaagcatgtggatgagtta
aaggtcctgaagatacatattaatttttctttggatcagccaaaaggaggtcttcatttc
gtggtacccagtgtagaggggagtatggcagagagaggtgctcatgtcttctcttgtggg
tatcagaattctacaagattttggttcccgtgtgttgattcctattctgagttgtgtacc
tggaaattagaattcacggtagatgctgcaatggtagccgtgtccaatggagacttggtg
gagacagtgtatactcatgacatgaggaagaagaccttccattatatgcttactattcct
acagcagcatccaatatctccttggccattgggccattcgaaatacttgtggatccatat
atgcatgaggttacccatttttgtttgcctcaacttcttccgttacttaaacatactacg
tcataccttcacgaagtttttgaattttatgaagaaattttgacttgtcgctatccatac
tcctgttttaagacagtcttcattgatgaggcttatgttgaagtagctgcttatgcttct
atgagcattttcagcacaaatcttctgcacagtgccatgattatagatgagacaccactg
accagacggtgcttggcacagtctttagcacagcagttcttcggatgtttcatatccaga
atgtcttggtctgatgaatgggtgctgaagggaatttcaggctatatttatggactgtgg
atgaaaaaaacgtttggtgtgaatgaataccgccattggattaaagaggagctagataaa
atagtggcatatgaactgaaaactgggggagttttactgcatcccatatttggtggtgga
aaagaaaaggataaccccgcatctcacctccacttttcaatcaagcatccacatacactg
tcctgggaatactataccatgtttcagtgtaaagctcacctcgtgatgagactgattgaa
aacagaatcagcatggaatttatgctgcaagttttcaataaactactaagtctggccagt
actgcttcatctcagaagttccagtcacatatgtggagccagatgctggtttccacctac
gggtttttgaagtccatttccaatgtctctggcaaagacatccagcccttaataaagcag
tgggtagaccagagtggagtggtaaagttttacggaagttttgcatttaatagaaaacgg
aatgttttagaactagaaatcaaacaggattacacatcgcctggcacccagaagtacgtg
ggaccacttaaagtgacagtgcaagagctagatggatccttcaaccataccttgcaaatt
gaagaaaacagccttaaacatgacataccctgccactccaaaagtagaaggaataagaag
aaaaaaatcccactgatgaatggggaagaagtcgatatggatctttctgcaatggatgcc
gactctcctttgttgtggataaggatagacccagatatgtctgtcctgaggaaggtggag
tttgagcaggctgacttcatgtggcagtatgagctccgctatgagagagatgtcgttgct
cagcaggaatccatcttggccttggagaagttccccacgccggcatcgcgccttgcactc
actgatatactagagcaggagcagtgtttctacagagtgaggatgtcagcctgcttctgt
cttgcaaagattgcaaactcaatggtgagcacatggacaggaccaccagccatgaagtcc
ctctttactagaatgttttgttgtaaaacttgtcccaacatcgtgaaaacaaacaacttc
atgagctttcagagttattttctacagaagactatgccagttgccatggctttgttaaga
gatgtacataatctttgtcccaaagaagttttaacatttattttagacttaatcaagtac
aatgacaacagaaaaaacaagttttcagataactattaccgtgcagaaatgattgatgcc
ctggctaactctgttacacctgctgtcagtgtgaataatgaagtcagaactttggataac
ttaaatcctgatgtgcgactaattcttgaggaaataacccgatttttgaatatggaaaaa
cttctcccaagttatagacatactatcactgtcagttgcttgagagccataagggtgctt
cagaagaatggacatgtgccgagtgacgcatctcttttcaaatcctacgctgagtatggc
cactttgtggacatcaggatagcagctctggaagccgttgttgattacactaaagtggac
aggagttatgaagaacttcaatggctacttaatatgattcagactgaccctgtcccctat
gtgaggcataagattctaaacatgttgactaaaaatccaccatttacaaagaacatggag
tctcctttgtgcaatgaagccctggtagatcagctctggaagctgatgaattctggtact
gcacatgactggaggttacgctgtggtgctgtggacttgtacttcacgctctttggcctc
agtagaccctcttgtttacccttgccagagcttgggcttgttcttaacctaaaagagaag
aaagctgtcttgaatcctaccataattccagaagccggagtaggcaaccaggactctgcg
agtaatccaggctgtcacgctcagctagctggatttcagaaccctttttcaggttctcag
gatgaggaggaggttgatatggatactgttcacgatagtcaggccttcatctcccatcat
ctgaacatgcttgagaggccgtccacgccagggctctccaagtaccgaccctccagctcc
aggtcttccttaatgccccagcattcactgggctctgacgttacaccagcccccaagccc
cagtggagtatggagctgactcgaaagggagcaggtaaagagcagcccttggagatgggc
atgcattccatggtggctgctccgctctcggtgtttgctaaggagtctctgtcctcccga
cacagtgagcaccatcaccaccatcaccatgagcacaagaagaagaagaagaagcacaag
cacaaacacaaacacaagcacaagcatgacagcaaggacaaggacaaggagccttttgcc
ttctccagccctgccagtggcaggtccgtgcgctccccgtcactctcagactga
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