Arvicanthis niloticus (African grass rat): 117719072
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Entry
117719072 CDS
T08817
Symbol
Top1mt
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anu03032
]
117719072 (Top1mt)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
117719072 (Top1mt)
DNA replication proteins [BR:
anu03032
]
Eukaryotic type
DNA Topoisomerases
117719072 (Top1mt)
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
DUF3568
Motif
Other DBs
NCBI-GeneID:
117719072
NCBI-ProteinID:
XP_034373054
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Position
13:complement(50612241..50635494)
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AA seq
598 aa
AA seq
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MLLLLWLKTLRRHFQYVPGRVPRRVPCRQVSRGAKASRAGWEESNKSSVKWTQLEHKGPY
FTPAYEPLPDGVHFFYDGKPVKLSLAAEEVATFYGKMLHLECVTKEVFRRNFFSDWRKEM
TAEERKLITHLDKCDFTEIHRHFLERAEARRTLPKEQKQKLKEEAEKLQQEFGYCILDGH
REKIGNFKTEPPGLFRGRGDHPKMGMLKRRVMPEDVVINCSRDSKIPEPPAGHQWKEVRS
DNTVLWLAAWMENIQNSFKYIILNPSSKPKGEMDWQKYEVARRLRGVVDKIRAQYRADWK
SPEMKKRQLAVALYFIDKLALRTGNEKEEGETADTVGCCSLRVEHVRLHAPSDGQEHVVE
LDFLGKDSIRYKNHMTVEKLVFQNLQHFMEDKDPRDDLFDALTTSSLNKHLQDLMEGLTA
KVFRTYNASVTLQEQLRVLTRAEDSLTCKVLAYNRANRAVAVLCNHQRAVPKTFEKLMQT
LQKKIEMKKAQVAEAQEELQKAEIDLRMRGDSKSKSFLQKQRRLLKLEEQLARLCAKATD
KEENKQVALGTAKLNYLDPRISIAWCKRFGVPVEKIYSKTQRERFAWAFNQAGEDFEF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgctttggctcaaaaccctacgccggcatttccagtatgtccccggccgt
gtcccccgccgtgtaccctgccgtcaggtgtcccggggcgcgaaggcgagcagagccggg
tgggaagaatcgaacaagagcagtgtgaagtggacgcagctggagcacaagggcccgtac
ttcaccccggcctatgagccccttcctgatggagtacacttcttctatgatggcaagccg
gtgaagctgagcctggcagcggaggaggtcgctaccttctatgggaaaatgctgcatctt
gagtgcgtgaccaaggaagtgttccggaggaacttcttcagtgactggcggaaggagatg
acagctgaggagaggaagctcatcacacaccttgacaaatgcgacttcacggagattcac
aggcacttcttggaaagagccgaggcccgcaggaccctgcccaaggagcagaagcagaag
ctaaaagaagaggctgagaagcttcagcaggagtttggctactgtattttagatggccac
agagaaaaaataggcaatttcaagacggaaccacccggcttgttccgtggccgaggtgac
catcccaagatggggatgttgaagaggagggtcatgccagaggatgtggtcattaactgc
agcagggattccaagatccctgagcccccagctggtcaccagtggaaagaggtacgctca
gataacacagtcctgtggctggctgcctggatggagaacatccagaactccttcaagtac
atcatactgaaccccagctccaagccgaagggggagatggattggcagaagtatgaagta
gcacgacgcttgaggggggttgtggacaagatccgtgctcagtatcgggccgactggaag
tccccagaaatgaagaagaggcagctggctgtggccctttattttattgataagctggca
ctgcggacaggaaatgagaaggaagagggtgagacggccgacaccgtgggctgctgctcg
ctgcgcgtggagcatgtccgactgcacgcaccctcagatggccaggagcatgttgtggag
ctggacttcttggggaaagattccatccgctataagaaccacatgacagtggagaagctt
gtgttccagaaccttcagcacttcatggaagacaaggaccctagggacgacctctttgat
gcactgactacttccagcctgaataagcacttgcaggacttgatggaggggctgacagcc
aaggtgtttcggacctacaatgcctctgtcactctgcaggagcagctgcgggtgctgacc
cgtgctgaagacagcctaacctgcaaagtcttagcttataaccgggcgaaccgggctgtg
gcggtcctctgtaaccatcagagggcagttcccaagacctttgagaagttgatgcagacg
ctccaaaaaaagattgagatgaagaaggcacaggtggctgaggcacaggaggaactgcag
aaggcagagattgaccttagaatgagaggggacagcaagtccaaaagtttccttcagaag
cagcggcggttgctgaagctggaggaacagctggcccgactgtgcgcgaaggccacagac
aaggaggagaataagcaggtggccctgggcactgccaagctcaactacctggaccccagg
atcagcatcgcttggtgtaagaggtttggagtgcctgtggagaagatttacagcaagacc
cagagagagaggtttgcctgggccttcaaccaggcaggcgaagactttgaattctaa
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