Arvicanthis niloticus (African grass rat): 117719093
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Entry
117719093 CDS
T08817
Symbol
Shank3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
117719093 (Shank3)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
PDZ_6
Ank_5
SH3_9
PDZ
SH3_1
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
117719093
NCBI-ProteinID:
XP_034373083
LinkDB
All DBs
Position
13:64144674..64202857
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AA seq
1805 aa
AA seq
DB search
MQLNRAAVAAAAAPAEPPEPLSPALAPAPAPPGPLPRSAVGGAPAGGQGGPGRRAESPCA
PLSAGNSPGPGASTGMDGPGASAVVVRVGIPDLQQTKCLRLDPTAPVWAAKQRVLCALNH
SLQDALNYGLFQPPSRGRAGKFLDEERLLQDYPPNLDTPLPYLEFRYKRRVYAQNLIDDK
QFAKLHTKANLKKFMDYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDNATDL
LKVLRNGGAHLDFRTRDGLTAVHCATRQRNAGALTTLLDLGASPDYKDSRGLTPLYHSAL
GGGDALCCELLLHDHAQLGTTDENGWQEIHQACRFGHVQHLEHLLFYGANMGAQNASGNT
ALHICALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVP
FRETPSYAKRRRLAGPSGLASPRPLQRSASDINLKGDQPAASPGPTLRSLPHQLLLQRLQ
EEKDRDRDGEQENDISGPSAGRGGHNKISPSGPGGSGPAPGPGPASPAPPAPPPRGPKRK
LYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADCVE
EVQMRQYDTRHETREDRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAILQKRDHEGFGFVL
RGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQV
VGLIRQGGNRLVMKVVSVTRKPEEDSARRRAPPPPKRAPSTTLTLRSKSMTAELEELASI
RRRKGEKLDEILAVAAEPTLRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGLPGP
EKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDTVREGRGIPPPPQTAPPPPPA
PYYFDSGPPPTFSPPPPPGRAYDTVRSSFKPGLEARLGAGAAGLYDSGTPLGPLPYPERQ
KRARSMIILQDSAPEVGDVPRPAPAATPPERPKRRPRPSGPDSPYANLGAFSASLFAPSK
PQRRKSPLVKQLQVEDAQERAALAVGSPGPVGGSFAREPSPTHRGPRPGGLDYSSGEGLG
LTFGGPSPGPVKERRLEERRRSTVFLSVGAIEGSPPSADLPSLQPSRSIDERLLGTGATT
GRDLLLPSPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQTP
SRSPTPVHSPDADRPGPLFVDVQTRDSERGPLASPAFSPRSPAWIPVPARREAEKPPREE
RKSPEDKKSMILSVLDTSLQRPAGLIVVHATSNGQEPNRLGAEEERPGTPELAPAPMQAA
AVAEPMPSPRAQPPGSIPADPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREELARIG
LVPPPEEFANGILLATPPPGPGPLPTTVPSPASGKPSSELPPAPESAADSGVEEADTRSS
SDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGKG
PVTFRDPLLKQSSDSELMAQQHHAASTGLASAAGPARPRYLFQRRSKLWGDPVESRGLPG
PEDDKPTVISELSSRLQQLNKDTRSLGEEPVGGLGSLLDPAKKSPIAAARLFSSLGELST
ISAQRSPGGPGGGASYSVRPSGRYPVARRAPSPVKPASLERVEGLGAGVGGAGRPFGLTP
PTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPSPGSGPSAGPRRPFQQKPLQ
LWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKEDFVELGVTRVGHRMNIERALR
QLDGS
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgcagctaaaccgtgccgccgtcgccgccgccgctgcgcctgcggagcccccggagccg
ctgtcccccgcgctggccccggccccggccccccccggccccctcccgcgtagcgcggtc
ggcggggctccggcggggggtcagggggggccagggcgccgcgcggagtccccgtgcgct
cctctctccgccgggaacagtccgggcccgggcgcaagcaccgggatggacggccccggg
gccagcgccgtggtcgtgcgcgtcggcatcccggacctgcaacaaacgaagtgcctgcgt
ctggacccaaccgcgcccgtatgggccgccaagcagcgtgtgctctgcgccctcaatcac
agccttcaggacgcgctcaactacgggctattccagcctccctcccggggtcgcgccggc
aagttcctggatgaagagcggctcttacaggactacccgccgaacctggacacgcccctg
ccctatctggagtttcgatacaagaggagagtttatgcccagaacctcatcgatgacaag
cagtttgcaaagttacacacgaaggcaaacctgaagaagttcatggactatgtccagcta
cacagcacagacaaggtggcccgcctgctggacaaggggctggaccccaattttcatgac
cctgactcaggagagtgccctctgagccttgccgcacagttggataatgccactgacctc
ctgaaggttcttcgcaacggcggtgctcatctggacttccgaacccgagatgggctaaca
gctgttcactgtgctacccgccagcgcaatgcaggggcattgacgaccctgctggacctg
ggggcttcacctgactacaaggacagccgcggcctgacgccactgtaccatagtgcccta
gggggcggggatgccctctgctgcgagctgcttctccatgatcatgcacagctggggacc
actgatgagaatggttggcaagagatccatcaggcctgccgctttggacatgtacagcac
ctggagcacctgctgttctatggggccaacatgggtgcccagaatgcctcgggaaacaca
gccctgcacatctgtgccctctacaaccaggagagctgtgcgcgcgtcctgcttttccgt
ggtgccaacaaggacgtccgcaattacaacagccagacagccttccaggtggccattatt
gcagggaactttgaactcgccgaggtaatcaagacccacaaagactcggatgtcgtacca
ttcagggaaacccccagctatgcaaagcgacggaggctggctggcccgagcggcttggca
tcccctcggcccttacagcgctcagccagtgatatcaacctgaaaggtgatcagcccgca
gcttctcctgggcccactctccgaagcctccctcatcaactactgctccaacggcttcag
gaggaaaaagaccgtgacagggacggcgagcaggagaatgacatcagcggcccctcagca
ggcaggggtggccacaacaagatcagccccagcgggcccggcggatccggccccgcgccc
ggccccggcccggcgtctcccgcgccccccgcgccgccgccccggggcccgaagcggaaa
ctttacagtgccgtccccggccgcaagttcatcgctgtgaaggcgcacagcccgcagggc
gagggcgagatcccgctgcaccgcggcgaggccgtgaaggtgctcagcattggggagggc
ggtttctgggagggaaccgtgaagggccgtacaggctggttcccagctgactgtgtggag
gaagtgcagatgcgacagtatgacacccggcatgaaaccagagaagaccggacgaagcgt
cttttccgccactacactgtgggttcctatgacagcctcacttcacacagtgattatgtc
attgatgataaggtggctatcctgcaaaaacgggaccatgagggttttggctttgttctc
cggggagccaaagcagagacccccattgaagagtttacacccacacctgccttccctgcg
ctccaataccttgagtctgtagatgtggaaggtgtggcctggagggccgggcttcgaact
ggggacttcctcattgaggtgaacggtgtgaacgtcgtgaaggtcggacacaagcaagtg
gtgggtctcatccgtcagggtggcaaccgcctggtcatgaaggttgtgtctgtgaccagg
aaaccagaggaggatagtgctcggcgaagagccccaccacccccaaagagggcccccagc
accacgctgaccctgcggtccaagtccatgacggctgagcttgaggaacttgcttccatc
cggagaagaaaaggggagaagttggatgagatcctggcggttgctgcggagccgacactg
aggccggacattgcggatgctgactcccgggcggccactgtcaagcagaggcccaccagc
cggaggattacccctgccgagatcagctcattgtttgagcgccagggcctcccaggccca
gagaagctgccgggctctttgaggaaggggattccacggaccaaatctgtaggggaggat
gagaagctggcatccctactggaagggcgtttcccacgcagcacatcaatgcaggacaca
gtgcgtgaaggtcgaggcattccacccccaccgcagacagccccgccacccccacccgcg
ccctactacttcgactccgggccacctcccaccttctcacctccaccaccaccgggccgg
gcctatgacactgtgcgctccagcttcaaaccaggcctggaggctcgtctgggtgcgggg
gccgctggcctgtatgattctggcacgcctctgggcccgctgccctaccctgagcgtcag
aagcgtgcacgctccatgatcatattgcaggactcggcgccagaagtgggtgatgttccc
cggcctgcacctgcagccacaccacctgagcgccccaagcgccggcctaggccgtcaggc
cctgatagtccctatgccaacctgggcgccttcagtgccagcctctttgctccatcgaaa
ccacagcgccgcaagagcccgctggtaaagcagcttcaggtggaggatgctcaggagcgc
gcggccctggccgtgggtagcccgggaccagtgggtggaagctttgcacgagaaccctcc
ccaacgcaccgtgggccccggccgggcggccttgactacagctccggagaaggcctgggg
cttacctttggcggccctagccctggcccagtcaaggagcggcgcctggaggagcgacgc
cgttccactgtgttcctgtctgtgggtgccatcgagggcagccctcccagcgcggatctg
ccatccctacaaccctcccgctccattgatgagcgcctcctggggacaggcgccaccact
ggccgcgatttgctgctcccctcccctgtctctgctctgaagccattggtcagtggtccc
agccttgggccttcaggctccaccttcatccaccctctcactggcaaacccttggatcct
agctcacccctagctcttgctctggctgcccgagagcgggctctggcctcgcaaacacct
tcccggtcccctacacctgtgcacagccctgatgctgaccgccctggacccctctttgtg
gatgtgcaaacccgagactccgagagaggaccgttggcctccccagccttctcccctcgg
agtccagcctggattccagtgcctgctcgcagagaggcagagaaaccccctcgggaagag
cggaagtcaccagaggacaagaaatccatgattctcagcgtcttggacacgtccttgcaa
cggccagctggcctcattgttgtgcatgccaccagcaatggacaggagcccaacaggctg
ggggctgaagaggagcgccccggtactccggagctggccccagcccccatgcaggcagca
gctgtggcagagcccatgccaagcccacgagcccagccccctggcagcatcccagcagat
cccgggccaggccaaggcagctcagaggaggagccagagctggtattcgctgtgaacctg
ccacctgctcagctgtcctccagcgacgaggagaccagagaggaactggcccgcattggg
ctagtgccaccccctgaagagtttgccaatgggatcctgctggccaccccgcccccagga
ccgggccccttgcccaccacggtacccagcccggcttcagggaagcccagcagcgagctg
ccccctgcccctgagtctgcagctgactctggagtggaggaggctgacactcgaagctcc
agtgacccccatctggagaccacaagcaccatttccacagtgtccagcatgtccaccctg
agctcggagagtggggaactcactgacacccacacctcctttgccgatggacacactttt
ctactcgagaagccaccagtgcctcccaagcccaagctcaagtccccgctggggaagggg
ccggtgaccttcagggacccactgctgaagcaatcctcggacagtgagctcatggcccag
cagcatcatgccgcctctactgggttggcttctgctgctgggcctgcccgccctcgctac
ctcttccagagaaggtccaagctgtggggggaccccgtggagagtcgggggctccctggg
cctgaagatgacaaaccaactgtgatcagtgagctcagctcccgtctgcagcagctgaat
aaagacacacgctccttgggggaggaaccagttggtggcctgggcagcctgctggaccct
gctaagaagtcgcccattgcagcagctcggctcttcagcagcctcggtgagctgagcacc
atctcagcgcagcgcagccccgggggcccgggcggaggggcctcctactcggtgcggccc
agcggccggtaccccgtggcgagacgagccccaagcccagtgaaacccgcatcgctggag
cgggtggaggggctgggggcgggcgtgggaggcgcggggcggcccttcggcctcacgcct
cccaccatcctcaagtcgtccagcctctccatcccgcacgaacccaaggaagtgcgcttc
gtggtgcgaagtgtgagtgcgcgcagccgctccccctcaccatctccgctgccctcgcct
tctcccggctctggccccagtgccggcccgcgtcggccgtttcaacagaagcccctgcag
ctctggagcaagttcgatgtgggcgactggctggagagcattcacttaggcgagcaccga
gaccgcttcgaggaccatgagatcgaaggcgcacacctgcctgcgctcaccaaggaagac
ttcgtggagctgggcgtcacacgcgttggccaccgcatgaacatcgagcgtgcgctcagg
cagctggatggcagctga
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integrated database retrieval system
