Arvicanthis niloticus (African grass rat): 117719234
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Entry
117719234 CDS
T08817
Symbol
Asic1
Name
(RefSeq) acid-sensing ion channel 1 isoform X1
KO
K04829
acid-sensing ion channel 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
117719234 (Asic1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117719234 (Asic1)
Ion channels [BR:
anu04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
117719234 (Asic1)
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Motif
Pfam:
ASC
EFP
Motif
Other DBs
NCBI-GeneID:
117719234
NCBI-ProteinID:
XP_034373283
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Position
13:73909806..73938596
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AA seq
558 aa
AA seq
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MPIQIFCSVSFSSGEEAPGFMGDIWGPHHHRQQQDSSESEEEEEKEKEAGTELDEGDSPR
DLVTFANSCTLHGANHVFVEGGPGPKQALWAVAFVIALGAFLCQVGDRVAYYLSYPHVTL
LDEVATTELVFPAVTFCNTNAVRLSQLSYPDLLYLAPMLGLDEGDDPGVPLAPPGPEAFS
GEPFNLHRFYNRSCHRLEDMLLYCSYCGGPCGPHNFSVVFTRYGKCYTFNSGQDGRPRLK
TMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPFIDQLGFGVAPG
FQTFVSCQEQRLIYLPSPWGTCNAVTMDSDFFDSYSITACRIDCETRYLVENCNCRMVHM
PGDAPYCTPEQYKECADPALDFLVEKDQEYCVCEMPCNLTRYGKELSMVKIPSKASAKYL
AKKFNKSEQYIGENILVLDIFFEVLNYETIEQKKAYEIAGLLGDIGGQMGLFIGASILTV
LELFDYAYEVIKHRLCRRGKCQKEAKRSSADKGVALSLDDVKRHNPCESLRGHPAGMTYA
ANILPHHPARGTFEDFTC
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccagatcttttgctctgtgtcattctcctctggagaggaggccccaggattc
atgggagatatctggggtccccaccaccaccggcagcagcaggacagctcagaatcggaa
gaagaggaagagaaggaaaaggaggcaggaacagagctggatgagggtgactcacctagg
gacttggtgaccttcgccaacagctgtaccctccatggtgccaaccatgtctttgtggaa
gggggcccagggccaaagcaagccctatgggccgtggcctttgtcatagcactgggtgcc
ttcctgtgccaggtaggggaccgagttgcttattacctcagctacccgcacgtgactttg
ctagatgaagtggccaccacagagctggtcttcccagctgtcaccttctgtaacaccaac
gctgtgcggttgtcccagctcagttaccctgacttgctctacctggcccccatgctaggg
ctggatgaaggtgacgatcctggggtgcccctcgctccacctgggccagaggctttctcc
ggggagccctttaatctccatcgtttctacaaccgctcttgccaccggctggaggatatg
ctgctctattgttcctactgtgggggcccctgtggtccccacaacttctcagtggtcttc
acacggtatggaaagtgttacacattcaactcgggccaagatgggcggccacggctgaag
actatgaaaggtgggactggcaacggcctggagatcatgctggatattcagcaagatgaa
tacttgcctgtgtggggagagaccgacgagacgtccttcgaagcaggcatcaaagtgcag
atccacagccaggatgaacctcctttcatcgaccagctgggctttggcgtggccccaggc
ttccagacatttgtgtcttgccaggagcagaggctcatctacctgccctcaccctggggc
acctgcaatgctgttaccatggactcggatttcttcgactcctacagcatcactgcctgc
cggattgactgtgagactcgttacctggtggaaaactgcaactgtcgaatggtacacatg
ccaggggatgccccatactgcactccagagcagtacaaggagtgtgcagatcctgccctg
gacttcctagtggagaaagaccaggaatactgcgtgtgtgagatgccctgcaacctgacc
cgctatggcaaggagctgtccatggtcaagatccccagcaaagcctcagccaagtacctg
gccaagaagttcaacaaatctgaacagtacataggggagaacattctggtgctggacatt
ttctttgaagtcctcaactatgagaccattgagcagaaaaaggcctatgagatcgcaggg
ctcttgggtgacatcgggggccagatggggttgtttattggggccagcatcctcacagta
ctggaactctttgactatgcctacgaggtcattaagcaccggctgtgtagacgtgggaag
tgccagaaggaggctaagaggagcagcgcagataagggcgtggcactcagcctggatgac
gtcaaaagacacaatccctgcgagagcctccgaggacatcctgccgggatgacgtacgct
gccaacatcctacctcaccatcccgctagaggcacgtttgaggactttacctgctaa
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