Arvicanthis niloticus (African grass rat): 117719318
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Entry
117719318 CDS
T08817
Symbol
Scrt1
Name
(RefSeq) transcriptional repressor scratch 1
KO
K09219
scratch
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117719318 (Scrt1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
117719318 (Scrt1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-BED
zf-C2H2_11
DpnI
Motif
Other DBs
NCBI-GeneID:
117719318
NCBI-ProteinID:
XP_034373365
EnsemblRapid:
ENSANLG00005015000
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All DBs
Position
13:complement(51659496..51665413)
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AA seq
348 aa
AA seq
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MPRSFLVKKVKLDTFSSADLDSSYGRARSDLGVRLQDKGYLSDYVGPASVYDGDAEAALL
KGPSPEPMYAAAVRGELGPAASGSAPPPTPRPELATAAGGYINGDAAVSEGYAADAFFIT
DGRSRRKAANANAAAAPSTASVAAPDSDAGGGGGPGTRGSGSGSASRGGTRVGAGTEARA
GPGATGAGGRHACGECGKTYATSSNLSRHKQTHRSLDSQLARRCPTCGKVYVSMPAMAMH
LLTHDLRHKCGVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSA
FKHFQCKRCKKSFALKSYLNKHYESACFKGGASGPATPAPPQLSPVQA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggtccttcctggttaagaaggtcaaacttgacacattctcttcggcagacctc
gacagctcctacgggcgcgcccgcagcgatctcggagtgcgactgcaagataaaggatac
ctcagtgactacgtggggcctgcgtcggtctacgatggcgacgctgaggcggcgttgctc
aaagggccatccccggagcctatgtatgctgcggctgtgcggggagagctgggtcccgcg
gcctctggctcagcaccgccgcccacccctcgcccagagctggctactgctgctggcggc
tacatcaacggcgacgcggcggtcagcgaaggctacgcggccgacgccttcttcatcact
gacgggcgctcacgccgtaaggctgctaatgccaacgctgccgcggccccctcgacagcc
tcggtggcagcccccgacagcgacgctggaggtgggggcgggccgggcacgcgaggctct
ggatcagggtccgctagtcggggtggcacgcgcgtgggggcgggcaccgaggcgcgtgcg
gggccgggagccacgggcgctggtggccggcacgcgtgcggagagtgtggcaaaacttac
gccacgtcgtcgaacctgagccgccacaagcaaacgcaccgcagcttggacagccagctg
gcaaggcgttgcccaacgtgtggcaaggtgtacgtgtccatgccggccatggctatgcac
ctgctcacgcacgacctgcgccacaagtgcggcgtgtgcggcaaagccttctctcggccc
tggctgctgcagggccatatgcgctcgcacacgggcgagaaacccttcggctgtgcgcac
tgcggcaaggccttcgcagaccgctccaacctgcgcgcacacatgcagacgcattccgcc
ttcaagcacttccagtgcaagcgctgcaagaagagcttcgcgctcaagtcttatctcaac
aagcactacgagtcagcctgcttcaagggcggcgccagcggccccgcaacccctgcgccg
ccgcagctcagcccggttcaagcctag
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