Arvicanthis niloticus (African grass rat): 117719424
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Entry
117719424 CDS
T08817
Symbol
Cpt1c
Name
(RefSeq) carnitine O-palmitoyltransferase 1, brain isoform isoform X1
KO
K19524
carnitine O-palmitoyltransferase 1, brain isoform [EC:
2.3.1.21
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00071
Fatty acid degradation
anu01212
Fatty acid metabolism
anu03320
PPAR signaling pathway
anu04148
Efferocytosis
anu04152
AMPK signaling pathway
anu04714
Thermogenesis
anu04920
Adipocytokine signaling pathway
anu04922
Glucagon signaling pathway
anu04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
117719424 (Cpt1c)
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
117719424 (Cpt1c)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117719424 (Cpt1c)
09150 Organismal Systems
09152 Endocrine system
04922 Glucagon signaling pathway
117719424 (Cpt1c)
04920 Adipocytokine signaling pathway
117719424 (Cpt1c)
03320 PPAR signaling pathway
117719424 (Cpt1c)
09159 Environmental adaptation
04714 Thermogenesis
117719424 (Cpt1c)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
117719424 (Cpt1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
anu03029
]
117719424 (Cpt1c)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
117719424 (Cpt1c)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117719424 (Cpt1c)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
117719424
NCBI-ProteinID:
XP_034373499
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All DBs
Position
1:complement(18624012..18638764)
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AA seq
802 aa
AA seq
DB search
MAEAYQASSLLSSLSSDGAEVQLSSPVWQEIYLSALRSWKRHLWRVWNDVLAGVVPATPL
SWLFLFSTIELACLLQLDPSLGLMEKIKELLPAWGGQHYQLQGLLAAAVFASCLWGALIF
TLHVALRLLLSHHGWLLEPHGTMSSPTKTWLALVRIFSGRHQRLFSFQRALPRQPVPLVQ
ETVSKYLESVRPVLGDDAFDHATALANDFLRLQAPRLQLYLQLKSWCASNYVSDWWEEFV
YLRSRAPLIHSTYYMMQDFLYVTPTPLQAARAGNAVHTLLLYRCLLNRQEIPPTLLMGMR
PLCSAQYERMFNTTRIPGVEKDYLRHLQDSRHVAVLHRGRFFRVGTHSSNGLLSPRALEQ
QFQDILDDPSPACPLEEHLAALTAAPRSMWAQVRESVKTHAAAALEVVEGAAFFVSLDSE
PAGLTREDPATSLDAYAHTLLTGRGHDRWFDKSFTLVVFSNGKLGLSVEHSWADCPVSGH
LWEFTLATECFQLGYATDGHCKGHPDPTVPQPQRLQWDLPEQIHPSISLALRGAKTLSGN
IDCHVFPFSHFGKSFIKCCHVSSDSFIQLVLQLAHFRDRGHFCLTYESVMTRLFLEGRTE
TVRSCTKEACQFVRAMDDKEKTDQQCLALFRVAVDKHQALLKAAMSGQGIDRHLFALYIM
SQLLHVQSPFLTQVQSQQWLLSTSQIPVQQTHLFDVHNYPDYVSSGGGFGPANDHGYGIS
YIFMGENAITFHISSKKSSTETDSHRLGQHIESALLDVASLFQVGQQFKRQFKGLGENLG
YRYGFLSCKTVDPNIPTSSTNL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcctaccaagcctcgagcttgctgtcttcactgagttccgacggggcagaa
gtacagctcagctccccagtgtggcaggagatttacctctctgccctacgctcctggaaa
aggcatctctggcgcgtctggaatgatgttctcgctggtgtagtccctgcaacccccctc
agctggcttttcctcttcagtacaatcgagcttgcttgcctcctccagctggacccttcc
ctaggactgatggagaagatcaaagagctgctgccagcctggggcggacagcactatcag
ctccaggggctcctggcagcagcagtgtttgcctcatgtttgtggggagccctgatcttc
acacttcacgtggctctgaggctccttctgtcccaccatggctggcttctggaacctcat
ggcaccatgtcctcacccacgaagacctggctggcattggtcagaatcttttccgggagg
caccaaaggcttttcagcttccaacgtgcgctcccgcggcagccagtgcccttggtgcag
gagaccgtgagcaagtacctggagtctgtgcgccctgtgctcggagacgacgctttcgac
catgctacggcgctggcgaacgacttcctgagattgcaggcaccacggctacagctctat
ttgcaactcaagtcctggtgtgcttccaactatgtcagtgactggtgggaagagtttgtg
tacctgcgttctcgagccccactaattcatagcacatactacatgatgcaggattttctg
tatgtcacccccacaccgctgcaggcagcccgcgcgggcaatgctgtgcatacccttctc
ctgtatcgctgccttctgaaccggcaggagatcccaccgacactgttgatggggatgaga
cccttatgttccgcccagtacgagaggatgttcaacactacacggattccaggggtggaa
aaagactaccttcgtcacctccaggacagccgacatgtggctgtcctccaccggggcaga
ttcttccgtgtagggacccactcttcgaatggcctgctgtccccacgggccctggaacag
cagttccaggacatcctggatgacccctccccagcctgtccccttgaggaacatctagct
gctttgactgctgctcccaggagtatgtgggcccaggtgcgggagtcggtgaagacccat
gcagccgctgccttggaggttgtagaaggggctgccttctttgtgtcccttgattctgag
cctgcgggactgaccagagaggaccctgcaacttccctggatgcctacgcccatactctg
ctgactggccgaggccatgaccgttggtttgacaaatccttcaccctcgtcgtcttctcc
aatggcaagctgggtctcagtgtggagcactcatgggccgactgccctgtctcaggacat
ttgtgggagttcaccctggccacagagtgcttccagttgggatatgccacagatggccac
tgtaaggggcaccctgaccctaccgtgccccagccccagcgcctgcagtgggacctccca
gagcagatccatccgtccatctctctagccctgaggggagccaagaccttgtctggcaat
atcgactgccacgtcttccccttttcccacttcggcaagagcttcatcaaatgttgtcat
gtctcttcagacagtttcatccagctggtcctgcagctggcccacttccgggacaggggt
cacttctgcctgacttatgagtcagtcatgactcgactgttcctggaaggcaggacagag
acggtgaggtcttgtaccaaagaggcctgccagtttgtgagagccatggatgacaaggag
aagacagaccaacagtgccttgccctgttccgagtggccgtggacaaacaccaggctcta
ctaaaggcagcgatgagtgggcaggggatcgaccgccatctcttcgcactctacatcatg
tcccagctcctccatgtgcagtcgcccttcctgacccaggtccagtcgcagcaatggctg
ctgtccaccagccagattcctgtgcagcagacacacctgtttgatgtccacaattatccg
gattatgtttcttctggaggtggatttgggcctgccaacgaccatgggtatggcatctct
tacatcttcatgggggaaaatgcgatcaccttccacatctccagcaagaaatcaagcaca
gaaacagactcgcatcggctggggcagcacattgaaagtgctctgttggatgtagcctcc
ctgttccaggtgggacagcagttcaagcgccagttcaaggggcttggggagaatttgggt
tatagatacggctttctctcctgtaagactgtggaccccaatatccccacatcctccacc
aacttgtga
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