Arvicanthis niloticus (African grass rat): 117719533
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Entry
117719533 CDS
T08817
Symbol
Taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03022
Basal transcription factors
anu05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117719533 (Taf4b)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
117719533 (Taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117719533 (Taf4b)
03036 Chromosome and associated proteins [BR:
anu03036
]
117719533 (Taf4b)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117719533 (Taf4b)
Coactivators
SAGA/TFTC/STAGA complex
117719533 (Taf4b)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117719533 (Taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
117719533
NCBI-ProteinID:
XP_034373543
LinkDB
All DBs
Position
14:complement(70769759..70870717)
Genome browser
AA seq
852 aa
AA seq
DB search
MPAGLTEPAGAAAPVVSSSSGAVTMAPVAALPVRVESTPMALGPVTKASVSVCVESVAPQ
PLPAPVGTLVTKVVPVTALPKLGSPRLPAPQIVTVKTPGTATIQLPANLQLPPGTVLIKS
NSGQLMLVSPQQALTGAKTPSNITPRPAVPANAQTVKICTVPNASSQLMKKVTVAPVKNL
TQIGTTVATTASGTSSGQPVTVPSNVVTVTPAKPVNTVSILKPSSVGVLSTPSNDSGPKA
ETSVAAQTGLPPTVLENVKKCKNFLSMLIKLACSGSQSPEMGQNVKKLVEQLLDAEIEAE
EFTRKLYIELKSAPQPHLVPFLKKSVVALRQLLPNSQSFIENCVQEVSGDVVISSCTVTT
ATSPVVTSTVSPVLVSGATAPRTLSVQQTLHSLAGPGGANTGVVTLHSVAPAAATGGTTA
ATVLLQTSKPLTTSVPNTVAAVSLQPENPVVSGAAVTLAVPSATFGEVSATPLCLPSVKP
AITSAGTKADKPAIGTPVQITLAQPSPLLPQSAGIPQAGKVKQLVVQQPSGGSANKVTSI
SHSSPLSTLNCGQKTLVNTVMPTTSIIKQITLPGNKLLSLQAQTSSIQNNKIKENGPTCF
RGEDDINDVTCMAEVNLDEENACILATHSDFVGTLIQSCKEEPFLVIGALQKRILDIGKK
HDITELNSDAVNLISHATQERLRGLLEKLTTIAQHRMTVYKGSENYTLSTDTRSQLKFLE
KLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKELQQLELAQIQYRDANLTA
LAAIGPRKKRPLESGNESFKDNPSTSGTSSLTATKPLLRPRITRICLRDLIFCMEQEREM
KYSRALYLALLK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgggcctcacggagccggcgggcgccgctgctcctgtcgtctcaagctcctcg
ggggccgtgaccatggctccggtcgccgcgctgcccgtgcgggtggagagcaccccgatg
gccctgggccctgtgactaaggcttctgtcagtgtctgcgtggagtctgtggctccccag
cccttgccagccccagtggggactctagtgaccaaagtggttcctgtcactgccctgcct
aaactcggcagccctaggctgcccgctcctcagatagtcaccgtgaaaactcccggcacc
gcgacaatccaactaccggctaatttgcagcttcctccaggaacagttttgatcaaaagt
aacagtggtcagttgatgctggtctctcctcagcaagctttaacaggagccaagacccca
agtaacataactccaagaccagcagtaccagcaaatgctcagacagtcaagatctgtaca
gtgccgaatgctagctcacaattaatgaagaaagtaacagtggcacctgttaaaaatttg
acacagataggaacaactgtggcaaccactgcctccggtacttcctcaggacaacctgtg
actgtaccaagcaatgttgtcacagttactcctgcaaagccggtgaatactgtatccatc
ctgaagccatcaagtgtaggagtattatctaccccctcaaatgactcaggtcccaaagcc
gagacttcagtagctgctcagactggtcttcctccgacagtgctagaaaatgtgaagaaa
tgtaaaaacttcctttcaatgttaataaaactagcatgtagtggatcgcagtctccagaa
atggggcagaatgtgaagaagctggtggaacaacttttggatgcagaaattgaagcagaa
gaatttactaggaaactatatattgaactcaagtctgcacctcagccacaccttgttcct
tttcttaagaagagtgtggttgccttaagacagcttcttccaaactcccagagcttcatt
gagaactgtgttcaggaagtttctggtgatgtggtcatttcttcctgtaccgtgacaaca
gcgacttctcctgtggtgacaagtacagtttccccagtccttgtctctggagcaacagca
cccagaactctgtctgttcaacagactctgcattcacttgctggtccaggaggagcaaac
actggagttgtgacactgcattctgtggccccagctgctgcaacaggaggtacaacagct
gcaactgttttgcttcagacttcaaaaccacttacaacatcggtaccaaatacagtggca
gcagtgtcccttcagcctgaaaatccagtagtgtctggagcagcagtaacactggccgtt
ccatcagcaacttttggagaagtgtctgctacacctctttgtcttccatctgtgaagcct
gccattacctctgctgggaccaaagctgataaacctgccattggcactccagtccagatc
acacttgcacagccgagccctctccttccacaatcagctggcattccacaggcaggcaaa
gtcaagcaactagtagtccagcagccttcaggaggcagtgcgaataaggtgacctccatt
tcccactcctcaccactgagtactctgaactgtgggcagaagacactagtgaatactgtg
atgcctactacttctatcataaagcaaattactctgcctggaaataaacttttgtcgctt
caagctcaaacatcttctattcagaacaataaaataaaagagaatggaccaacatgcttc
agaggtgaagatgacatcaatgatgtgacttgcatggcagaggtcaaccttgatgaagaa
aatgcctgtatcttagcaacacattctgactttgttggcacactcattcagtcgtgtaaa
gaagaaccattccttgtcattggagctctacagaagagaattttagacattggtaaaaag
catgacattacggaacttaactctgatgctgtgaacttgatctcccatgcaacccaggag
agattacgaggccttctagagaaactaactacaattgctcagcaccggatgactgtttac
aagggtagtgaaaattataccttgtctactgacaccagatcacagctcaaatttcttgaa
aaactcgatcaattggagaaacagaggaaggatttagaagaaagagagatgttactaaag
gcagccaagagccgctccaataaagaagatccagaacagctgagattaaaacagaaagcc
aaagagctgcagcagttggagcttgcccagatccaatacagagatgctaatctcacagct
cttgcagctattggaccacggaagaagagaccactagagtcaggaaacgagagcttcaaa
gataatccttctacttctgggacttccagcctaacagccaccaaaccattgcttcgtcca
agaatcacaagaatctgcctcagggacttgatattctgtatggaacaggagagagagatg
aagtattctcgagccctataccttgctcttcttaagtga
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