KEGG   Arvicanthis niloticus (African grass rat): 117719596
Entry
117719596         CDS       T08817                                 
Symbol
Wdr7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:anu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    117719596 (Wdr7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:anu04131]
    117719596 (Wdr7)
Membrane trafficking [BR:anu04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    117719596 (Wdr7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML EIF3I CFAP251_N WDR55 ASA1 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 PAC11 WDR72_alpha-sol WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_SCAP PEP5_VPS11_N Tricorn_2nd Beta-prop_Vps41 PD40
Other DBs
NCBI-GeneID: 117719596
NCBI-ProteinID: XP_034373667
LinkDB
Position
14:complement(25027052..25286995)
AA seq 1490 aa
MAGNSLVLPIVLWGRKAPTHCISSILLTDDGGTIVTGCHDGQICLWDLSVELEVNPRALL
FGHTASITCLSKACASGDKQYTVSASANGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFS
VGNQQEGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
SVTGILKVWIVTSEISGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDV
GKAVENLIPPVQHSLLDQKDKELVICPPVTRFFYGCKEYLHKLLIQGDSSGRLNIWNIAD
IADKQEADEGLKMTTCISLQEAFDKLKPCPAGIIDQLSVIPNSSEPLKVTASVYIPAHGR
LVCGREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCVCSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCTDGSVYVWQMDTGALDRCAMG
ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
QKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDEEEDEEEVMRQRREESDPEY
RASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
GGHMSLMLPGYNQAAGKLLPPAKAEVGRKLPAMEGVGKGTYTVSRAVTTQHLLSIISLAN
TLMSMTNATFIGDHMKKGPTRPPRPGTPDLSKARDSPPSSSNIVQGQIKQAAAPVVSARS
DADHSGSASASPALQTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRC
LEVREAAQALLLAELRRIEQAGRKETIDTWAPYLPQYMDHVISPGVTAEAMQTMAAAPDA
SGTEAKVQEEEHDLVDDDITTGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAE
IEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPLHSTIRRT
AIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALS
LIATARPPAFITTIAKEVHRHTALAANTQSQQSIHTTTLARAKGEILRVIEILIEKMPTD
VVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALY
DIRTGKCQTIHGHKGPITAVSFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQ
LRCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4473 nt   +upstreamnt  +downstreamnt
atggcaggaaacagtctagttctgcccattgttctttggggccgcaaagcacccacacat
tgtatttcatcaatactgttgacagatgatgggggtacaattgtaactgggtgccacgat
ggacaaatatgtctctgggatctttcagtagaactggaggttaatccccgagcactgtta
tttggtcacacagcgtccatcacttgtttgtcaaaagcctgtgcttctggggacaaacag
tacactgtgagtgcatctgcaaatggagagatgtgcctctgggatgtgaatgacggcaga
tgcattgaatttacaaaattagcctgcacacacactggcatacagttctaccagttctct
gttggaaatcagcaagagggaaggcttctgtgccatggacattaccctgaaatcctcgtg
gtggatgccaccagccttgaggtgttgtattctctggtatcaaagatatcgccagactgg
attagctccatgagcattatccgctcacaccggacacaagaggacactgtggtagcgctc
tccgtgacaggtattctgaaggtgtggattgttacctctgaaattagtggaatgcaggat
actgagccaatatttgaggaggaatccaaaccaatttactgtcagaattgccaaagcatc
tctttttgtgcattcacgcagaggtcacttttggtcgtgtgctccaaatactggagggtg
ttcgatgctggcgactactccctgttgtgttcaggtcctagtgaaaatggacagacatgg
actggaggggactttgtgtctgcagacaaagtcatcatttggactgaaaatgggcagagt
tacatttataaactccctgccagttgccttccagctagtgattcattccgcagtgacgtg
gggaaagcagttgaaaatttgattcctcctgtgcagcatagtctcttggatcagaaggat
aaagagttggtaatttgtcctcctgttactcgatttttctatggatgcaaggaatatttg
cataagctactaattcagggtgattcttctggaaggttaaatatttggaacatagcagac
atagcagataaacaggaagctgatgaagggctaaaaatgacaacttgtattagtttgcaa
gaggcatttgacaaactgaagccttgtcctgctggaattatcgatcagctaagtgtgatt
cccaacagcagtgaacctcttaaagtaactgcaagcgtctacataccagcacatgggcga
cttgtttgtggccgggaagatggaagcattatcattgtgcctgccacccagacggccata
gttcaactactgcaaggagaacacatgctcagaagaggttggccccctcacagaaccctc
cgtggccatcggaacaaagtcacgtgtctgctgtatcctcatcaggtctcagctcggtat
gatcaaagatacctgatatctggaggtgtggatttttctgtcataatttgggacatattt
tctggagaaatgaaacatatcttctgtgttcatggtggtgagatcacacaacttctggtc
ccaccggaaaactgtagtgcaagagttcaacattgcgtctgttctgtagccagtgaccac
tctgtcggactcctaagtctgcgggagaaaaaatgcatcatgttggcgtctcgccacctg
tttcctattcaggtgatcaagtggaggccttccgatgactacctggtggtgggatgcaca
gacggctctgtgtatgtctggcagatggacactggtgccctggatcgctgtgcaatggga
ataacagcagtggagattctgaatgcttgtgatgaagccgtccctgcagctgtagactca
cttagtcatccagcagtcaacctgaaacaagctatgaccagacggagtctcgccgccctt
aaaaacatggcccaccataagctgcaaacccttgcaactaatcttttggcttctgaggcc
tctgataaggggaatttacctaaatattctcataactccctgatggttcaagcaataaag
acaaacctaacagacccggatatccatgtgctgttctttgatgtggaagctttgattatt
caactcctgactgaagaagcctctaggccgaatactgcacttatttccccagagaatctg
cagaaagcatctggcagttcagacaaagggggctcgttcctaactgggaaacgagcagca
gttcttttccagcaagtgaaagaaactatcaaagagaacataaaggagcacctcctggat
gaggaggaggacgaggaggaggtgatgaggcagaggagggaagaaagtgaccctgagtac
cgggccagcaagtccaagccactgaccctactagaatacaaccttactatggataccgca
aaattattcatgtcctgtctccacgcctggggcttgaatgaagttctggatgaagtttgt
ctcgatcgcctcggaatgctgaaaccacactgcaccgtgtcctttggtctcttatcgaga
ggaggtcatatgtcgttgatgcttcctggttataatcaggctgctggaaaactgctgcct
cctgcgaaagcagaagtaggaaggaagctgccagccatggagggcgtaggcaaggggacc
tacacagtgtcacgagccgtcaccactcagcatctgttgtccatcatatccctggcaaat
actttaatgagtatgaccaatgcaacgttcattggagatcacatgaagaagggccccacc
aggccgcctagaccaggcaccccagacctttctaaggcaagggattcccctccatcctcc
agtaacattgtgcaaggacagattaaacaagctgctgcacctgtcgtttctgctcggtct
gatgctgatcactctggctctgcctctgcctctcctgctttacagacctgtttcttagta
aatgaaggatggagccagttagctgccatgcactgtgttatgctgcctgaccttctgggg
ctggataaatttaggcctcctctcctggagatgctagctcggagatggcaagaccgatgc
ttggaggtgagggaggctgcacaggccctgcttctagcagagctgagaagaattgagcag
gcaggacggaaggagactatcgacacctgggctccttacttacctcaatatatggaccat
gtcatatcacctggagtcacggcagaagccatgcagactatggcagctgctccagatgct
tcagggacagaagctaaagtccaggaagaagaacatgacctcgtggatgatgacatcact
acgggttgcttatcaagtgttccacaaatgaaaaaaatttccacgtcttatgaagaaagg
aggaagcaggccacggctattgttctcctgggagtgataggggcagaatttggagctgaa
attgaaccaccgaaactgctgaccagacctcgaagctctagtcaaattcctgaagggttt
ggcttgacaagtggaggctccaactactcattggccagacatacttgcaaggcactgaca
tttcttctgctacagccaccaagtcccaaacttcctcttcatagcaccatccggagaact
gccattgacctgattgggcgagggttcactgtgtgggagccttacatggatgtttccgct
gtcctgatggggctgctggagctctgcgcagatgctgagaaacaacttgccaacatcaca
atggggctgcctctgagccctgcagctgactctgcccgctctgcaaggcacgccctttct
ctcattgccaccgccagaccacccgccttcatcaccaccatagccaaggaggtgcacaga
cacacggcccttgcagcaaatacccagtcacagcagagtatacacaccaccaccctggca
agagctaaaggcgaaatcctcagagtcattgaaattctcattgaaaagatgcctacggat
gttgtggatcttcttgtggaggttatggacatcatcatgtactgccttgaaggatcatta
gttaaaaagaagggtcttcaggaatgttttccagctatctgcaggttctacatggtcagc
tattatgagcggagtcacagaattgcagttggagcacgccatggctcagtagccctgtat
gacatccggactggaaaatgtcagacaatccacgggcacaagggaccaatcactgcagtg
tcctttgctcctgatgggcgttatcttgccacctactcaaacaccgacagccacattagt
ttctggcagatgaacacctcactcctgggaagcattggcatgctgaactccgcacctcag
ctgcgctgcatcaagacctaccaggtacctccagtgcagcctgcatcccctggctcccac
aatgcccttaagttggcccggctcatctggacttccaaccggaatgttatcctcatggcc
catgatgggaaggaacaccgcttcatggtctga

DBGET integrated database retrieval system