Arvicanthis niloticus (African grass rat): 117719697
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Entry
117719697 CDS
T08817
Name
(RefSeq) protocadherin beta-18-like
KO
K16494
protocadherin beta
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117719697
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Protocadherins
117719697
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
MCR_gamma
Motif
Other DBs
NCBI-GeneID:
117719697
NCBI-ProteinID:
XP_034373799
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All DBs
Position
14:complement(50142700..50146398)
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AA seq
775 aa
AA seq
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MMEPEVGAAQHIRQVLVFFVFLEGSFVLSKTWSYSVAEEMETGSSIANIIKDMNVGDLAA
RGARVIFDDYQPYLRLELETGNLLLNEKLDREALCSTSEPCILHFQVLLENPLQFFQAEL
LIEDINDHTPKFLEKCIFLNISEGATPGTSFQMDNAQDLDIGMNGIQNYSISPNPYFYLK
LKDSGKGRIYPELVLAKSLDREKEASVSLTLTAMDGGSLPRSGTVLVQVVVMDVNDNAPE
FEKALYEVQVPENSSVNSLVIKVSATDLDSGINGEISYSFSHISRDVQNTFEIHPISGEV
HLKRLLDFEVIQSYTINVQAIDGGSLSGKSVIIVQVTDMNDNPPEIVITSLMSPIPENGL
SEMVVAVFSLRDQDSGENGRMMCSIQDKIPFLLKPTFKNFYTLVTEHPLDRENRAEYNIT
IKVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVRENNSPALHIGTISATDSDS
GSNALITYSLLPSQDPQLALASLFSINADNGQLFALRALDYEALQAFEFHVGATDRGSPA
LSSQALVRVVVLDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDMSKHRLLLVVKDNGDPPRSVSVTLHL
LVVDGFSQPYLPLPEVARDPTHVDEEALTLYLVIALASVSSLFLLSVLLFVGVRLCRRAR
AASLGSYSEPDGHFPGHLVDFSGAGTLSQSYQYEVCLTGVSDSKDIQFLKPVSQA
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcctgaagtaggagctgctcagcatataaggcaagtgctggttttctttgtt
ttcctggaagggtccttcgttctttccaagacctggagttactctgtggcagaagaaatg
gagactggctcctctatagccaatataattaaagatatgaatgtgggtgacctggctgca
cggggggccagagttatatttgatgactatcagccttatttgcggttagaactggagact
ggcaacttgcttttgaatgaaaaactggacagggaggcactttgttctaccagtgaaccc
tgtatactgcatttccaggtgttactggaaaatcctctgcaattttttcaggctgagctt
ttgattgaagacataaatgaccatactcccaagtttctagaaaaatgcatatttctaaat
atttcagaaggtgctactccaggaacctcatttcaaatggataatgctcaggacttggat
atagggatgaatggtatccaaaactattcaataagccccaacccttatttctaccttaag
ttaaaagacagtggtaaaggaagaatatatccagagctggtactggccaaatctctggac
agagaaaaggaagcttcagttagcttaacactaacagctatggatggtgggtccttgccc
aggtcagggactgtactagttcaagttgtggttatggatgtcaatgacaatgcccctgag
tttgaaaaagccctgtatgaggttcaagtaccagagaacagttctgtgaactcactggta
atcaaggtgtctgctacagatttggattcaggaataaatggagaaatatcttattcattc
tctcatatctctagagatgtacaaaatacattcgaaatccatccaatctctggtgaagtc
catttgaaaagactcctagattttgaggtaattcagtcttatacaataaatgttcaagcc
attgatggtggcagtctctctggaaaatcagtcattattgttcaggttacagacatgaat
gacaacccaccagaaatagtcattacgtctcttatgagtcctatcccagagaacggtttg
tcagagatggtggtcgctgttttcagtttacgagaccaagactctggagaaaacgggaga
atgatgtgttcaattcaggacaagatcccttttctcttaaaacctactttcaaaaatttc
tacactcttgtaacagagcatccactggacagagagaacagggctgaatacaatatcacc
attaaggtctcagacctgggcacacccaggctcacaacccagcacaccataacagtgcag
gtgtctgacatcaatgacaacgcccctgccttcacccaaacctcctacaccatgtttgtc
cgcgagaacaacagtcctgccctgcacataggcaccatcagtgccacagactcagactca
ggctccaatgccctcatcacctactcgctgctgccatcccaagacccgcagctggctctc
gcctcgctcttctccatcaatgcagacaatggccagctgtttgcactcagggcactggac
tatgaggccctgcaggccttcgagttccacgtgggcgccacagaccgaggctcacccgcg
ctcagcagccaggctctggtgcgcgtggtggtgctggacgacaatgacaatgcgcccttt
gtgctctaccctctgcagaacgcttctgcaccctgcactgagctgctgcccagggctgcg
gaacctggatatctggtcaccaaggtggtggctgtggaccgcgactctggccagaatgcc
tggctgtcattccagctgctcaaggctacggagccggggttgttcagcgtgtgggctcac
aatggcgaggtgcgcaccaccaggctgctaagcgagcgcgatatgtccaagcacaggctg
ctgttggtggtcaaggacaatggcgatcctccccgctctgtcagtgtcacgctgcacctg
ttggtggtagatggcttctcccagccctacctacctctgccagaggtggcgcgcgatccc
acacacgtggatgaggaagcgctcacactttacttggtcattgccttggcttctgtgtct
tctctcttcctcctgtctgtgctgttgttcgtcggggtgaggctctgcaggagggccagg
gcggcctctctgggtagctattctgagcctgatggccattttcctggccacctggtggac
ttcagtggtgcggggacgctgtcccagagctaccagtatgaggtgtgtctgacaggagtg
tcggattccaaagatattcagttcctaaaacctgtctcccaagcttga
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