Arvicanthis niloticus (African grass rat): 117719698
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Entry
117719698 CDS
T08817
Name
(RefSeq) protocadherin beta-8-like
KO
K16494
protocadherin beta
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117719698
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Protocadherins
117719698
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
117719698
NCBI-ProteinID:
XP_034373800
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Position
14:complement(50178750..50181357)
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AA seq
802 aa
AA seq
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MEASRKLICRQRQVLFSFLLFGFSLTTAGELRRYSVVEEKEGRSFVTNLVKDLGLGQLEL
SRRGAKVISKGNKLRLQLDQETGDLLLTEKVDREELCGHTEPCLLSFQVLLDNPLDIFQA
ELEVTDINDHSPEFLNKEVMLKISESSVPGATFPLKNAQDMDVGQNGIDSYLVSSNSYFR
VLTRKRSDGKKYPELVLDRALDREEEAELRLTLTAQDGGSPPRSGTTEVHIEVLDINDNA
PQFEQLFYRVQIPEDSPIGFLIITVIATDRDIGVNGEISYSLFQVSDDISKTFSIHPLTG
EVRLKEHLDFEKTQSYEINIEARDAGTFSGKCTILTQVMDVNDHAPEIILSAFTNSILEN
LPETMVAVFSVSDLDSGENGKISCSIQEDLPFFLKPSGENFYTLLSQKPLDRETVAEYNI
TITVADMGSPILKTQVNLTVQVSDVNDNAPAFTQTSYTMFIRENNSPALHIGTISATDSD
SGSNALITYSLLPPHDSQLALSSLISINADNGQLFALRALDYESLQAFEFLVGATDQGSP
ALSSQALVRVVVLDDNDNAPFVLYPLQNASAPYTELLPRVAEPGYLVTKVVAVDRDSGQN
AWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGDPPRSASVTLH
VLVVDGFSQPYLPLPEVAHDPAHGDSELTLYLVIALASVSLLFLVSVLLFVGVRLCRRAR
DVSLGSCSVPEGHFPGHLVDVSGAGTLSQSYQYEVCLTGDSGTGEFKFLKPILPNFQDHS
LRPEMGENPNSRNDWDFGIQLK
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagcaggaagctcatttgcagacaaaggcaagtccttttttcctttctccta
ttcggcttctctctaacgactgcaggggaactgaggcgctattctgtggtggaggaaaag
gaggggaggtcctttgtaaccaatttagtaaaagacctaggtcttgggcagctggaactc
tccaggagaggagctaaggtcatttctaaaggtaacaaactacgtttgcagctggatcag
gagacaggggatttgctgttaactgagaaagtggaccgggaagaactgtgtgggcacaca
gagccatgcctgctaagcttccaagtgttgctagacaaccccttggatattttccaagct
gagctagaagtcacagacataaatgatcattctccagaattcctgaacaaagaagtcatg
ctaaagatatcagaaagcagtgttcctggagctaccttccctctgaagaatgctcaggac
atggatgtaggccaaaacggtattgacagctacctggtcagttccaattcctattttcga
gtgctcactcggaaacgcagcgatggcaagaaataccctgaactggtactagacagagca
ctggatagagaggaggaagctgagctcaggttaaccctcacagcgcaggatggcggctct
ccacccaggtctggaaccactgaagtccacattgaggtcctggacatcaacgacaatgct
cctcaatttgagcagctcttttacagggtgcagatccctgaggatagtccgataggcttt
ctgatcatcactgtaattgccacagatagggacattggcgtcaatggagagatctcctat
tcacttttccaggtttcagatgatattagcaaaacattctcaatccaccccttgacaggg
gaagtgcgattgaaagaacaccttgattttgaaaagactcagtcctatgaaatcaatatt
gaagcaagagacgctgggaccttttctggaaaatgcacaattctgacccaagtcatggat
gtgaacgaccacgctccggagattatcctgtccgcatttaccaactccatccttgagaat
ttaccagaaactatggtggcagtttttagcgtttctgatctagattcaggagaaaatggg
aaaataagttgttctattcaggaagatttacccttcttcctaaagccctctggggaaaac
ttttatacgctgttatcacaaaaaccactggacagagagactgtagcagaatataacatc
accatcaccgttgcagacatggggagtcccatcctgaaaacacaagtcaacttaacagtg
caggtgtctgacgtcaacgacaatgcccctgccttcactcaaacctcctacaccatgttc
atccgcgagaacaacagccccgccctgcacataggcaccatcagtgccacagattcagac
tcaggctccaatgccctcatcacctactcgctgctgccaccccacgactcacagctggcc
ctctcctcactaatctccatcaacgcagacaatgggcagttgttcgcgctcagggcactg
gactatgagtccctacaggccttcgagttcctcgtgggcgccacggaccaaggctcaccc
gcgctcagcagccaggctctggtgcgtgtggtggtgctggatgacaatgacaatgcgccc
ttcgtgctctacccactgcagaacgcctctgcaccctacactgagctgctgcccagggtg
gcagagcccggctacctggtcaccaaggtagtggctgtggatcgcgactctggccagaac
gcctggctgtcattccagctgctcaaggccacggagcccgggctgttcagcgtgtgggcg
cacaatggggaggtccgcaccactaggctgctgagcgagcgcgatgtgcccaagcacagg
ctgctgttgctggtcaaggacaatggtgatcctccgcgctctgccagtgtcacactgcat
gtgctagtggtggatggcttctctcagccctacctgcctctgccagaggtggcgcatgat
cctgcacatggggacagtgagctcacattgtacctggtcattgccttggcttctgtgtct
ttgctcttcctagtgtctgtgctgctgtttgtaggagtgaggctgtgcaggagagccagg
gatgtctctctgggtagctgctcggtacctgagggccattttcctggccacctggtggat
gttagtggcgcggggaccctgtcccagagctaccagtatgaggtgtgtctgacgggagac
tctgggactggtgagttcaaatttctgaaaccaattttacctaattttcaagaccattct
ctcagaccagaaatgggagaaaatcccaactctaggaacgactgggattttggtattcag
ttaaaataa
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