Arvicanthis niloticus (African grass rat): 117719703
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Entry
117719703 CDS
T08817
Name
(RefSeq) protocadherin beta-14
KO
K16494
protocadherin beta
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117719703
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Protocadherins
117719703
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
117719703
NCBI-ProteinID:
XP_034373805
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Position
14:complement(50193766..50196966)
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AA seq
797 aa
AA seq
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METSLHKAPQKRQVTAIIFLLLLWEAGSATIKYSVLEETDGGSLVGNLAKDLGLSLRELV
IRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTTPCILHFQVLLKSPVQFIQGE
IQLQDVNDHAPEFMEDEILLKIVESSHPGAVFPLKIAQDLDVGSNTVQSYTISTNAHFHL
LTRNHSDGRKYPELVLDKALDREEQAQIRLTLTALDSGTPPKTGTTQVVIVVLDINDNVP
EFAQGLYEVQVQENSPVGSLVITVSAKDLDAGTNGELSYSLFQSSNQVLRAFEINANTGE
IRLRKLLDFEEIQSYHMEIEASDGGGLSGKCTVVIDVTDVNDNAPEITMSLLISDIPENA
PETVVAIFGISDPDSGDNGKMVCSIQDHLPFLLKPNEENFYTLVTERALDRESRAEYNIT
IMVADLGTPRLTTQHTITVQVSDVNDNAPAFTQISYTMFVRENNSPALHIGTISATDSDS
GSNALITYSLLPPHDPQLALDSLISINADNGQLFALRALDYEVLQAFEFHVGATDQGSPA
LSSQALVRVVVLDNNDNAPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLVLLVKDNGDPPGSASVTLHV
LLVDGFSQPYLPLPEVAHDPAKEEDALTLYLVIALASVSSLFLLSVLLFVGVRLCRKARE
ASLGGCSIPEGHFPGHLVDVSGAGTLSQSYQYEVCLTGGSGTNEFKFLKPVLPNFLNEGG
YRNREENSNFRDCLGFS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagacatcacttcacaaggcaccacagaaaaggcaagtgaccgccattatctttctg
ttactactgtgggaggcaggcagtgcaaccattaagtattctgttctagaggagacagac
gggggctctttggtggggaacctagcaaaagatttagggctgagtttaagggagttggtc
atcaggggtgcccagattctttccaaagggaacaaacagctcctgcagctggagcagaag
agtggaaatttgctcctgaaagaaaaattggatcgagaggagttatgcgggagcaccacc
ccgtgcatcctacatttccaggtgttacttaaaagcccagtgcaatttattcaaggggaa
atacagcttcaagatgtaaacgatcatgccccagaattcatggaagatgaaattctcctt
aaaatcgtggaaagcagccatccaggtgccgtgtttccactgaaaatagctcaagatttg
gacgtagggagcaacacagttcagagctatacaatcagcaccaatgcccatttccacctt
ctcacccgcaatcacagcgatggcaggaaatacccagagctggtgctagacaaagcactg
gaccgggaggagcaggcacagataagattaacactcactgctctggacagtggaacacct
cccaaaactgggactacccaggttgtcattgtggtcctggacattaatgacaatgtccct
gaatttgcccaagggctctatgaggtgcaggttcaagagaacagccccgtgggctccctt
gtcatcactgtatccgcaaaagatttagatgccgggacaaacggagagctctcctattcg
ctttttcaatcttcaaatcaagttcttcgggcttttgaaataaacgcaaacaccggagaa
attagactaagaaaactgttagactttgaggaaattcagtcttaccacatggaaatcgag
gcctctgatggaggaggcctttcaggaaaatgcacagtagtaatagacgtgaccgatgta
aacgacaacgctcctgaaatcaccatgtcattactcatcagtgatattccagaaaacgcc
cctgaaactgtagtcgcgatttttggaatttcagatccagactctggagacaatggaaaa
atggtgtgctccatccaagaccatctgcccttcctcttgaaacctaatgaagaaaacttc
tacacgttggtaactgaaagagcactggacagagagagcagagctgagtacaacatcacc
atcatggtcgcagacctgggcacacccagactcacaacccagcacaccataacagtgcag
gtttctgacgtcaacgacaatgcccccgccttcacccaaatctcatacaccatgtttgtc
agggaaaacaacagccccgccctgcacataggcaccatcagtgccacagactcagactca
ggctccaatgccctcatcacctactcactgctgccaccccacgacccacagctggccctc
gactctctcatctctatcaatgcagacaacggccagctgttcgcgctcagggctttggac
tatgaggtcttgcaggcctttgagttccacgtgggcgccacagaccaaggctcacccgcg
ctcagcagccaggctctggtgcgcgtggtggtgctggacaacaatgacaatgcacccttc
gtactctacccgctgcagaacgcctctgcgccctgcacagagttgctgcccagggctgcg
gagcctggatacctggtcaccaaggtggtggctgtggatcgcgactctggccagaatgcc
tggttatcattccagctgctcaaagccacggagccagggctgttcagcgtgtgggcgcac
aatggcgaggtgcgcaccaccaggctgctgagcgagcgcgatgtgcccaagcacaggctg
gtgctgctggtcaaggacaatggcgatcctccaggctctgccagtgtcacgctgcacgtg
ttgctggtcgatggcttctctcagccctacctgcctttgccagaggtggcacacgaccct
gcaaaagaagaagatgcactaacactctacctggtcattgccttggcctctgtgtcttct
ctcttcctcttgtctgtgctgctgtttgtgggggtgaggctatgcaggaaggccagggag
gcttctctgggtggctgttcgattcctgagggacactttcctggccacctggtggatgtc
agcggtgcggggaccctgtcccagagctaccagtatgaggtgtgtctgacaggaggtagt
gggacaaatgagtttaaatttcttaaaccagtacttcccaacttcttgaatgaaggaggt
tacaggaacagggaagagaattctaattttagggattgtttggggtttagctaa
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