Arvicanthis niloticus (African grass rat): 117719704
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Entry
117719704 CDS
T08817
Name
(RefSeq) protocadherin beta-18
KO
K16494
protocadherin beta
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117719704
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Protocadherins
117719704
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
117719704
NCBI-ProteinID:
XP_034373806
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Position
14:complement(50165993..50169852)
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AA seq
792 aa
AA seq
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MAARGSRFPRQRQVLFLFLFGGLCLAGPEFGRYSVTEETERGSFVANLAKDLGLGVEALI
AKRTRVISDDNKQHLLLESHTGDLLTNEKLDREKLCGPTEPCMLYFQILMDNPFQIYRAE
LRILDINDHSPIFQDKKMILKIPENTAVGTTFRLQRAQDSDGGQNGIQNYTISPNSFFHV
TIGDSDEGMVYPELVLDKALDWEEQPEFSLTLTALDGGSPPRSGTATIHILVMDVNDNAP
QFPQEVYETQAPENSPVGLIVIKVTGEDVDSGVNAEISYSFFDASEDIRATFQINPFSGE
ITLRALLDYEFIKSYKLNVQAVDGGGLSARCTVLVRVLDINDNPPELTMSSLVNEVVENS
PETILAVFRINDRDSGENGKMVCYIQENLPFLLKPSIDNFYILMTEGALDRESRAEYNIT
ITVSDLGTPRLTTQHTITVQVSDINDNTPAFTQTSYTIFVRENNSPALHIGTISATDSDS
GSNALITYSLLPPQDPQLALASLISINADNGQLFALRALDYETLQAFEFHVGAIDRGSPA
LSSQALVRVVVLDDNDNAPFVLYPLQNASVPCTELLPRAAEPGYLVTKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGDPLRSASVTLHV
LLVDGFSQPYLPLPEVARNTTQKEEDVLTLYLVIALASVSSLFLLSVLLFVGVRLCRRAR
AASLGGCPVPEGHFPGHLVDVSGTGTLSQSYQYEVCLMGGSSGTSDFKFLKPIYPEVHAY
DSQGNRDENPTF
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaagaggatcacgcttccccagacaaaggcaagtgctatttctcttcctgttc
gggggactgtgtttggcaggtcctgagtttggacgttattcagtgactgaggaaacagaa
aggggatcatttgtggcgaatctagcgaaggatctggggctaggggtggaagcgctgatt
gcaaagagaactagggtgatttctgatgataacaagcagcacttgcttctggaatctcac
actggagatttgctcacaaatgagaaactggaccgggagaagctgtgcggccccacagaa
ccctgcatgctgtatttccaaattttaatggataacccctttcagatttaccgggctgag
ctgagaattctggatataaatgatcactcacccatattccaggacaaaaagatgatttta
aaaataccagaaaacacagccgtagggacaacatttcgattacaaagagcacaagactca
gatggtggacagaatggcatccaaaactataccatcagccccaactctttttttcatgtt
accattggtgacagcgatgaaggaatggtatatccagagcttgtgctagacaaagctctg
gattgggaggagcagccggagttcagtttaacactcacagcacttgatggcgggtctcca
cccaggtctgggacagccactatacatattctggtcatggacgtcaatgataatgcccca
cagtttccccaagaagtttatgaaacccaggctccagaaaacagtccagtaggccttatt
gtcattaaagtcaccggagaagatgtagactccggggtcaatgcagaaatatcctattca
ttttttgatgcttctgaagatattcgagcaacctttcaaatcaaccctttctctggggaa
atcacgctcagagccttgcttgactatgagttcataaagtcctataagttaaatgtccag
gcagttgatggtggaggcctttctgcaagatgcacggttctagttcgggttttagacatt
aatgacaacccccctgaactgaccatgtcatcacttgtcaatgaagttgttgagaactca
cctgaaaccatactggcagtttttaggattaatgacagagactctggagagaatggaaaa
atggtttgctacattcaagaaaatctgcctttccttctgaaaccttccatagacaatttt
tacatcctaatgacagaaggagcactggacagagagagcagagctgagtacaacatcacc
atcactgtctcagacctgggcacacccaggctcacaacccagcacaccataacagtgcag
gtgtccgacatcaacgacaacacccctgccttcacccaaacttcctacaccatcttcgtc
cgtgagaacaacagccctgccctgcacataggcaccatcagtgccacagactcagactca
ggctccaatgccctcatcacctactcgctgctgccaccccaagacccgcagctggccctc
gcctcgctcatctccatcaatgcagacaatgggcagctgtttgcgctcagggcactggac
tatgagaccctacaggccttcgagttccatgtgggtgcaatagaccgaggctcgcccgcg
ctcagcagccaggctctggtgcgggtggtagtgctggacgacaatgacaatgcgcccttt
gtgctctacccactgcagaacgcttctgtgccctgcactgagctgctgcccagggcggca
gagcccggctatctggtcaccaaggtggtggctgtggaccgcgactctggccagaatgcc
tggctgtcgttccaattgctcaaagccaccgagccaggactgttcagcgtgtgggcacac
aatggggaggtgcgcaccaccaggctgctgagcgagcgcgatgtgcccaagcataggctg
ctgctgctggtcaaagacaatggcgatccactgcgctctgccagtgtcacactgcatgtg
ttactggtggatggcttctctcagccctacctgcctctgccagaggtggcacgcaacacc
actcaaaaggaagaggatgtgctcacactgtacctggtcatagccttggcatctgtgtct
tctctcttcctcttgtctgtgctgctgtttgttggggtgagactgtgcaggagggccagg
gcggcctctctgggtggctgccctgtgcctgagggacactttcctggacaccttgtggac
gtcagcggtacaggaacactgtcccagagctaccaatatgaggtgtgtctaatgggaggc
tcctctggtaccagtgatttcaagttcttgaaaccgatttaccctgaagttcatgcttat
gattcccagggcaatcgtgatgaaaaccccacattttga
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