Arvicanthis niloticus (African grass rat): 117719705
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Entry
117719705 CDS
T08817
Name
(RefSeq) protocadherin beta-7-like
KO
K16494
protocadherin beta
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117719705
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Protocadherins
117719705
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
117719705
NCBI-ProteinID:
XP_034373807
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Position
14:complement(50182836..50185680)
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AA seq
800 aa
AA seq
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MEGIWGFILKVLERMETRLEQAVQKRQVLFLCVFLGASWASAEQLQYSVAEETERGAFLA
NLAKDLGLGLEELSAREARLVSDQNTRFLLLSLLTGELILNEKLDREELCGPTEPCVLTF
QLLLERPFQIYRAELHVKDINDNSPVFLDKEIHLKISESTTPGATFFLERAQDSDVGTNS
LSNYTISPNDYFHIHVHDGGEGTIVPELVLDKMLDREEIPEFTLTLTALDGGSPPRSGTA
LVQILVLDINDNSPQFVQSLYKVQSPENTPVGSLVVTVSATDLDTGSYGQIRYTFSYATE
RILQTFQINSTSGELCLKRELNYEAIQTYSITIQARDGGGLSGKCTVVVEVMDVNDNPPE
FLLSSLNSPIPENSPETVVAVFRIRDRDSGNNGKTMCSITRDLPFVLKPSVENFYTLVTE
KPLDRESNTEYNITISVTDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFIRENNSP
ALHIGTISATDSDSGSNALITYSLLPPHDTQLALDSLISINADNGQLFALRALDYESLQA
FEFHVGATDRGSPALSSQALVRVVVLDDNDNVPFVLYPLQNASAPYTELLPRAAEPGYLV
TKVVAVDHDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKD
NGDPPRSASVTLHVLLVDGFSQPFLTLPEVAHDPAQEEDELTLYLVIALASVSSLFLVSV
LLFVGVRLCRRARESPPGVCFVPEEHFPGHLVDVSGAGTLSQNYQYEVCLTGESGITSEF
KFLNPITPNFLTESTGREIE
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaatttggggttttattttgaaagtcttggaaagaatggagaccagactggag
caagctgtgcagaaaaggcaagtactgtttctttgtgtatttctgggagcgtcttgggct
agcgccgaacagcttcagtattctgtggcagaggaaactgagagaggcgctttcctagcc
aatctagcaaaggatttggggttggggctggaggaactgtcagcccgggaagctagactt
gtttcagaccagaatacacggtttttactgctcagtctgcttactggggaattaattcta
aatgagaagctggaccgagaggaactgtgcggccccacagagccctgtgtgctgactttc
cagttgctgttggaaaggccatttcagatttatcgtgctgaattacatgtcaaagacata
aatgataattctccagtatttctagacaaagaaatacacttgaaaatatcagaaagtacc
acgccaggggccacattcttcttggagagggcacaggattccgatgtgggaacgaacagc
ctgagtaactacaccatcagccccaacgattacttccacattcatgtacatgatggaggg
gaagggactatcgttcctgaactggtactggataagatgctggaccgagaagaaatacca
gaattcactttaaccctcacagccttagatggtggctctccacccagatctgggacagcc
ttggtgcaaatcttggtgttggacataaatgacaactcccctcaattcgtgcagtcactt
tacaaagttcaatcacctgaaaatacccctgttggctccttggttgtcactgtgtctgcc
acggacttagatacaggaagttatggacaaatacggtacacattttcttatgccactgaa
agaattctccaaacgtttcaaatcaattctacatctggcgaactttgtcttaaacgcgaa
ctcaactatgaagcaattcaaacttattcaataactattcaggccagagatggtggcgga
ctttctgggaagtgtactgtggttgtagaggtaatggacgtaaatgataacccacctgag
tttctcttgtcgtcacttaacagcccaattcccgaaaattcaccagagacggttgttgct
gtttttagaattagagacagagattcagggaacaacgggaaaaccatgtgttccatcacc
cgtgatctccctttcgtcctgaagccatctgtggaaaacttctatactctggtcacagag
aagcctttagatagagaatcaaacactgaatacaacatcaccatatcagtcaccgacctg
ggcacacccaggctcacaacccagcacaccataacagtgcaagtctctgacatcaacgac
aacgcccctgccttcacccaaacctcatacaccatgttcatccgcgagaacaacagcccc
gccctgcacataggcaccatcagtgccacagactcagactctggctccaatgccctcatc
acctactcgctgctgccaccccacgacacgcagctggccctcgactcgctcatctccatc
aacgcagacaatgggcagttgttcgcgctcagggcactggactatgagtccctacaggcc
ttcgagttccacgtgggcgccacggacagaggctcacccgcgctcagcagccaggctctg
gtgcgcgtggtggtgctggatgacaatgacaatgtgcctttcgtgctctacccacttcag
aacgcctctgcaccctacactgagctgctgcccagagctgcggagcccggatacctggtc
accaaggtggtggcagttgaccatgattctggccagaatgcctggctgtcattccagttg
cttaaggccacagagcccggactgttcagcgtgtgggcgcacaatggcgaggtgcgcacc
accaggctgctgagcgagcgcgatgtgcccaagcacaggctgctgctgctggtcaaggac
aatggtgatcctccgcgctctgccagtgtcactctgcacgtgttgctggtcgatggcttc
tctcagcccttcctgactctgccagaggtggcgcacgaccctgcacaagaagaagatgag
ctaacactctacctggtcattgccttggcctctgtgtcttctctcttcctagtgtctgtg
ctgctgtttgttggagtgagactctgcaggagagccagggagtcccctccgggtgtctgc
tttgtgcctgaggaacactttcctggccacctggtggatgtcagcggtgcagggaccctg
tcccaaaactaccagtatgaggtgtgtctaactggagaatcagggataaccagtgaattt
aagttcctaaatccaattacccctaacttcctaacagaaagcacagggagagaaatagaa
taa
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