Arvicanthis niloticus (African grass rat): 117719706
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Entry
117719706 CDS
T08817
Name
(RefSeq) protocadherin-3
KO
K16494
protocadherin beta
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117719706
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Protocadherins
117719706
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
117719706
NCBI-ProteinID:
XP_034373808
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Position
14:complement(50205833..50208866)
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AA seq
796 aa
AA seq
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METALAKIPQQRQVAFLTILLLLWKSGSEAIRYSTPEETESGYLVANLAKDLGLRVGELA
TRGAQIHYKGNKELLQLDAETGNLFLKEKLDREALCGATEPCVLHFQIILENPVQFFQTE
LQLTDVNDHSPEFPDRKMPLTIPESAQPGTVFPLKAAQDSDIGSNAVQNYTVSPNIHFHV
VTHSRSDGRKYPELVLDRALDREEQPELTLILTALDGGVPPRSGTTAVHIEVVDINDNAS
QFIQSLYEVQILENSPLDALVVTVSARDLDAGIYGNVAYSLFQSDGVSQPFVIDEVTGEI
RLSKELDFEGISSYNIEIAATDGGGLSGKCTVAIQVLDMNDNPPELTIRKLTVPVPENSA
ETVVAVFSVSDSDSGDNGRMVCSIPNNIPFLLKPTFENYYSLVTEGPLDRESRAEYNITI
TVSDLGTPRLTTQQTVAVQVADINDNAPSFTQTSYTMFVRENNSPALHIGTISATDSDYG
SNAHIIYSLLPPHDPQLDLASLISINSDNGQLFALRALDYEVLQTFEFHVDATDQGLPAL
SSQAQVRVVVLDDNDNAPFVLYPLQNASTPCTELLPRAADPGYLVTKVVAVDRDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTTRLLNERDAPKHKLLLLVKDNGDPLRSASVTLHVL
VVDGFSQPYLPLAEVAQDSTQDDYDVLTLYLVIALASVSSLFLFSVLLFVGVRLCRRARA
ASLGDYSVPEGHFPGHLVDVSRAGTLSQSYQYEVCLNGGTGTNEFNFLKPLFPIAPTQAA
AEERDNAVVRSNVEFY
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagacagcgctagcaaaaataccacagcaaaggcaagtcgcttttcttactatattg
ttgctattgtggaaatctggctctgaggccattagatattccacgccagaagaaacagag
agtggctacttggtggctaatttggcaaaagatctggggctcagggttggagaactagcc
actagaggagctcagatccattacaaaggaaacaaagagctcctgcagctggatgcagag
actgggaatttgttcttgaaggaaaaactagaccgtgaggcactatgtggggcgacagaa
ccctgtgtgctgcacttccagatcatactggaaaaccctgtacagttcttccaaactgaa
ctgcagctcacagatgtaaacgaccattctccagagttccctgacaggaaaatgcctcta
acaattcctgagagtgcccagccagggaccgtgtttcctctgaaggctgctcaggactct
gacataggaagcaatgctgttcagaactacacagtcagtcctaatatccacttccatgtc
gtcactcacagtcgctcagatggcaggaaatacccagagctggtgctggacagagccctg
gacagggaggagcagcctgagctcactttaatcctcactgctctggatggtggagtccca
ccccggtcaggaaccactgcagttcacattgaagttgtggacatcaatgataatgcctcc
cagtttatacagtcactctatgaggtgcagattctcgaaaatagcccccttgatgcctta
gttgtcacggtgtctgccagggatttagatgctgggatatatggcaatgtagcctattct
ctgtttcaaagcgatggagtatctcaaccatttgtaatagatgaagtcacaggagaaata
cgtctgagcaaagagctggattttgaaggaattagcagttataacatagaaatcgcagcc
acagatggagggggcctatcaggaaaatgcactgtggctatacaggtgttggatatgaat
gacaatcccccagagttgacgattaggaagctcacagtccctgtcccagaaaattccgcc
gaaactgtagttgctgtttttagtgtttctgattctgattcaggggacaatggaaggatg
gtgtgttctatcccaaacaatattccatttctcctgaaacccacatttgagaactattac
agtttagtgacagagggaccactcgatagagagagcagagctgagtacaacatcaccatc
acggtctcagacctgggcacacccaggctcacaacccagcagaccgtagcagtacaggtg
gctgacatcaacgacaatgcccccagcttcacccaaacctcctacaccatgttcgtccga
gagaacaacagccccgccctgcacataggcaccatcagtgccacagactcagactatggc
tccaatgcccacatcatctactcgctactgcctccccacgatccacagctggaccttgcc
tcgctcatctccatcaattctgacaatgggcagctgtttgctctaagggcactggactat
gaggtgcttcagactttcgagttccacgtggacgctacagaccaaggcttgcccgccctc
agcagccaggctcaggtgcgcgtggtggtgttggatgacaatgacaatgctcccttcgtg
ctctaccctttgcagaacgcctctacaccctgtactgagctactccccagggcagcagat
cccggatacctggtcaccaaggtggtggctgtagatcgtgactctggccagaatgcctgg
ctgtcgttccagctactcaaggcaactgagcccgggctgttcagtgtgtgggcgcacaat
ggcgaggtgcgcaccaccaggctgctgaatgagcgcgatgctccaaagcacaagctcttg
ctgctggtaaaggacaatggcgatcccctgcgctctgctagtgtcacccttcacgtgcta
gtggtggatggcttctcacagccttacctgccattggcagaggttgcacaggattccacg
caggacgattatgacgtgctcacgctgtacctagtcattgccttggcatctgtatcttca
ctcttccttttctctgtgctgctgtttgtaggggtgaggctgtgtcggagggccagggcg
gcctccctgggtgactattctgtgcctgagggacactttcctggccacctggtggatgtt
agtagagcggggaccctgtcccagagctaccaatatgaggtgtgtcttaatggaggtact
ggaacaaatgagttcaacttccttaagccattgtttcctatcgctccgacccaggctgct
gctgaagaaagagacaatgctgttgtgcgcagtaacgttgaattctattag
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