Arvicanthis niloticus (African grass rat): 117719707
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Entry
117719707 CDS
T08817
Name
(RefSeq) protocadherin beta-6-like
KO
K16494
protocadherin beta
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117719707
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Protocadherins
117719707
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
117719707
NCBI-ProteinID:
XP_034373809
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Position
14:complement(50226610..50229429)
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AA seq
797 aa
AA seq
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METTRAKTPEKRQVVFLTMLLLLWKSGAEAIRYSMPEETESGYLVANLAKDLGLGVGELA
IRGTRIHYRGNKELLQLDAETGNLFLKEKPDREALCGATEPCVLHFQIILENPVQFFQTE
LQLTDINDHSPEFLDKKMLLKIPESAQPGTVFPLKAAQDPDIGSNAVQNYTVSPNLHFHV
VTHSRSDGRKYPELVLDRALDREEQPELTLILTALDGGAPPKSGTTTVQIEVVDINDNVP
QFIQSLYEVQILENSPLDALVVTVSARDLDAGIHGNVAYSLFQGDGGSQPFVIDEITGEI
RLKGTLDFEATPHYNMEIVATDTGGFSGKCTVAIQVVDVNDNAPKLTISSLTTSIPENAP
EAVVAVFSVSDSDSGENGRMVCSIQNELPFLLKPTFENYYTLITEGPLDRESRAEYNITI
MVSDLGTPRLTTQHTIIVQVSDINDNAPAFAQTSYTMFVHENNSPALHIGTISATDSDSG
SNAHISYSLLPTSDPQLAITSLVSINEDSGQLFALRALDYEILQAFEFGVGATDRGSPAL
SSQALVRVVVLDDNDNAPFVLYPLQNASAPCKELVPRAAEAGYLVTKVVAVDRDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGEPPRSSTVTLHVL
LVDGFSQPYLPLSEVVQDPTQEGDDALTLYLVIALASVSSLFLFSVLLFIGMRLCKKARG
ASLGVCSMPEGHFPGHLVDISRTGTLSQSYQYEVCLTGDSGTGEFKFLKPMISNLMVQDP
GREMKESPHCRHSIVFS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacaagagcaaaaacgccagagaaaaggcaagtcgtttttcttactatgttg
ttgctattgtggaagtctggtgctgaggcaattagatattccatgccagaagaaacagag
agtggctatttggtggctaatttggcaaaagatctgggactcggggttggagaactagcc
attagaggaacacgaatccattatagaggaaacaaagagctcttgcagctggatgcagag
actgggaatttattcctcaaggaaaaaccagaccgtgaggcgctgtgtggggcgacagag
ccctgtgtgctgcacttccagatcatactggaaaaccctgtgcagttcttccaaactgaa
ctgcaactcactgatataaacgaccactctccagagttccttgacaagaaaatgctacta
aaaatccctgagagtgcccagccagggaccgtgtttcctctgaaggcagctcaggaccct
gacatagggagcaacgctgttcagaactacacagtcagtcccaaccttcatttccatgtc
gttactcacagtcgctcagatggcaggaaatacccagagctggtgctggacagagccctg
gacagggaggagcagcctgagctcactttaatcctcactgctctggatgggggagccccg
cccaagtctgggactaccacggttcaaattgaagtcgtggacatcaatgataatgtcccc
cagtttatacagtcactctatgaggtgcagattctcgaaaatagcccccttgatgcctta
gttgtcacagtctctgctagggatttagatgctggcatacatggcaatgtagcctattct
ctgtttcaaggtgatggaggttctcaaccatttgtaatagatgaaatcacaggagaaatc
cgtctgaaagggacattggattttgaggcaactccacattataacatggaaattgtagct
acagacacaggcggcttttcaggaaaatgcactgtagctatacaggtggtggacgtgaac
gacaatgcccctaaactcaccatatcttcgctcactacttccatcccagaaaatgctcct
gaggccgtagttgctgttttcagtgtctctgactcggattctggggaaaatggaaggatg
gtttgttctattcagaatgaacttccatttcttttgaagcccacatttgagaattattat
actttaataacagaggggccactggacagagagagcagagctgagtacaacatcaccatc
atggtctctgacctgggcacacccaggctcacaacccaacacaccataatagtgcaggtg
tctgacatcaacgacaatgcccctgcctttgcccaaacttcctacaccatgttcgtccac
gagaataacagccccgccctgcacataggcaccatcagtgccactgactcagactctggc
tctaatgcccacatcagctactcgctgctgcctaccagtgatccccagctggccatcacc
tctcttgtctccatcaatgaagacagtgggcagctgtttgcactcagagcgctggactat
gagatcctgcaggccttcgagttcggcgtgggtgccacagaccgtggttcacccgccctc
agcagccaggctctggtgcgcgtggtggtgctggatgacaatgacaatgcgcccttcgtg
ctctacccactgcagaacgcctctgcaccctgtaaggagctagtgcccagagctgcggag
gcaggttacttggtcaccaaggtagtggctgtggaccgcgactctggccagaatgcctgg
ctgtcttttcagctgctcaaggccacggagcccgggctcttcagcgtgtgggcacacaat
ggcgaggtgcgcaccaccaggctgctgagtgagcgcgatgtgcccaagcacaggctgctg
ctactggtcaaggacaatggagagcctcctcgctcttctacagtcacgctgcatgtgttg
ctggtggatggcttctctcagccttacctgcctttgtctgaagtcgtgcaggaccccact
caggaaggtgatgacgctctcacgctttacctggtcattgccttggcatctgtgtcttca
ctcttcctcttctctgtcttgctcttcattgggatgaggctgtgcaagaaggccaggggg
gcttctctgggtgtctgctctatgcctgagggacactttcctggccacctggtggatatc
agcagaacaggaactctgtcccagagctaccagtatgaagtgtgtctgactggagactct
ggaactggtgagttcaaattccttaaacccatgatctccaacctaatggttcaggaccct
gggagagaaatgaaggaaagtccgcactgcaggcatagcattgtattcagttaa
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