Arvicanthis niloticus (African grass rat): 117719713
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Entry
117719713 CDS
T08817
Name
(RefSeq) protocadherin beta-6 isoform X1
KO
K16494
protocadherin beta
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117719713
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Protocadherins
117719713
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
117719713
NCBI-ProteinID:
XP_034373814
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Position
14:complement(50271858..50278089)
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AA seq
772 aa
AA seq
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MEAALAKTPEKRQVIFLAILFLLWEDGSEAIRYSMPEETESGYLIANLAKDLGFRVGELA
SRGARIHHRGNKDLLQLDVETGNLLLKEKPDREALCGVTEPCVLHFQIILENPVQFFQTD
LQLTDVNDHSPEFPDTEMLLKIQESAQPGTVFPLKAAQDPDIGSNTVQNYTVSPNLHFHV
VTHSRSDGRKYPELVLDRALDREEQPELTLILTALDGGAPHRSGTTTVRIEVVDINDNAP
QFVQSLYAVEIPENSPFNALVVTVSARDLDAGIHGKVAYSLFQGSGGSQPFVIDEITGEI
HLKGALDFEATPYYNMEIVATDSGGLSGKCTVAIQVVDVNDNAPKLTISSLTSSIPENAP
EAVVAVFSVSDPDSGENGRMVCSIQNELPFLLKPTFENYYSLVTEGPLDRESRAEYIITI
TVSDMGTPRLTTQHTITVQVSDINDNAPAFTQTSYTLVVHENNSPALHIGTISATDSDSG
SNAHITYSLLPPSDPQLALGSLVSINADNGQLFALRAIDYEALQTFEFLVGATDEGSPAL
SSQALVRVVVMDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDSDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGDPPRSASVTLHVL
VVDGFSQPYLPLPEVARDPSQEEDLLTLYLVVALASVSSLFLLSVLLFVGVRLCRRAREA
SLGGCSVPEGHFPGHLVDVSRMGTLSQSYQYEVCLSGDSETTDFKFLNHYSQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgcgctagcaaaaacgccagagaaaaggcaagtgatttttcttgctatattg
tttctactgtgggaggatggttctgaggcaattagatattccatgccagaagaaaccgag
agtggctacttgatagctaacctggcaaaagatctggggttcagggtaggggaactggcc
agtagaggggcccgaatccatcacagaggaaacaaagacctcttgcagctggatgtagaa
acagggaatttgctcttgaaggaaaaaccagatcgtgaagcactgtgtggggtgacagaa
ccctgtgtgttgcacttccagatcatactggaaaaccctgtgcagttctttcaaaccgac
ctgcagctcacagatgtaaacgaccattctccagagttccctgacactgaaatgctccta
aaaattcaagaaagtgcccagccagggactgtgtttcctctgaaggcagctcaggaccct
gacataggaagcaacactgttcagaactacacagtcagtcccaacctccatttccatgtc
gttactcacagtcgctcagatggcaggaaatacccagagctggtgctggatagagccctg
gacagggaggagcagcctgagctcactttaatcctcactgctctggatgggggtgctcca
cacagatctgggactaccacggttcgaattgaagttgtggacatcaacgataatgctccc
cagtttgtacagtcactctatgcggtggagatccctgagaacagccccttcaatgcctta
gttgtcacagtctctgccagagatttagatgctggcatacatggcaaagtagcctactct
ctgtttcaaggcagtggaggttctcaaccatttgtaatagatgaaatcacgggagaaatt
catcttaaaggggcattggattttgaggcaactccatattataacatggaaattgtagct
acagacagtggaggtctttcaggaaaatgcactgtagctatacaggtggtggacgtgaac
gacaatgcccccaaactcaccatatcttcgctcactagttccatcccagaaaatgctcct
gaggctgtagttgctgttttcagcgtctctgacccagattctggggaaaatggaaggatg
gtttgttctattcagaatgaacttccatttcttttgaaacccacattcgagaattactac
tctttagtgacagaagggccactggacagagagagcagggctgagtacatcatcaccatc
acagtctctgacatgggcacacccagactcacaacccagcacaccataacagtgcaggtc
tctgacatcaacgacaacgcccctgccttcacccaaacctcctacaccctggtggtccac
gagaacaacagccctgccctgcacataggcaccatcagtgccacagactcagactcaggc
tccaatgcccacatcacctactcgctgctgccacccagcgacccgcagctggccctcggc
tcgctggtctccatcaatgcagacaacgggcagctgttcgcgctcagggcaatagactac
gaggccctgcagaccttcgaatttctcgtgggcgccacagatgaaggctcgcctgcgctc
agcagccaggctctggtacgggtggtggtgatggatgacaatgacaatgcacccttcgtg
ctctacccgctgcagaacgcctctgcgccctgcactgagctgctgcccagggcggcagag
cccggctacctggtcaccaaagtggtagcagtggactctgactctggccagaatgcctgg
ctgtcattccagctgctcaaagccacggagcccgggctgttcagcgtgtgggcgcacaat
ggcgaggtgcgcaccaccaggctgctgagcgagcgcgatgtgcccaagcacaggctactg
ctgctggtcaaggacaatggagatcctccgcgctctgccagtgtcacactgcatgtgcta
gtggtagatggcttctctcagccctacctgcctctgccagaggtggcgcgcgacccttca
caggaagaagacttgctcacactttaccttgttgttgctttggcctctgtgtcttcgctc
ttcttactttctgttctgttgttcgtgggggtgaggttgtgcaggagggccagggaggct
tccctgggaggctgctctgtgccagagggacactttcctggccacttggtggacgtcagc
cgtatggggacactgtcccagagctaccagtatgaggtgtgtctgagtggagactctgag
acaacagattttaaattcctgaaccactattcgcaatag
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