Arvicanthis niloticus (African grass rat): 117719715
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Entry
117719715 CDS
T08817
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-3-like
KO
K16494
protocadherin beta
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117719715
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Protocadherins
117719715
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
REJ
Motif
Other DBs
NCBI-GeneID:
117719715
NCBI-ProteinID:
XP_034373818
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Position
14:complement(50299556..50302093)
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AA seq
797 aa
AA seq
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MEAREERFLKQRQVLLLFVFLGGSLAGSGSKRYSVAEEKERGFVIANLEKDLGLSVEELA
KRRAQAISKGNIQYFQLSHQTGDLLLVERLDREELCGSTEPCVLHFQILLHNPLQFITNE
LEVIDVNDHAPEFFENAMQLKVLESSPPGTVIPLGNAVDLDVGRNGLQNYTIFPKSHFRV
HTRHRRDGRKYPELVLDRALDREEQPELSLTLTALDGGSPPRSGTTQVHILVLDINDNAP
EFTQSLYEVQILEKSPVGSVITTVSASDLDMENFGAISYEFFHASEEILKTFQLNPTTGN
IQLLKGLDYETINTYEVDIEAKDGGGLSGKCTVIVQVLDVNDNPPELTLSSVNSLIPENS
AETVVAVFSVSDSDSGDNGRVICFIQNDLPFILKPSVENFYTLASEGVLDRESRAEYNIT
ITVSDLGTPRLTTQHTITVQVSDINDNAPVFTQTSYTMFIRENNSPALHIGTISATDSDS
GSNALITYSLLPPHDPHLALDSLVSINSDNGQLFALRALDYETLQAFEFRVGATDRGSPA
LSSQALVRVVVLDDNDNSPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGDPPRSASVTLNV
LLVDGFSQPYLPLPEVARDSMQNDVDLLTLYLVIALASVSSLFLLSVVLFVGVRLCRRAR
AASMSGCSVSEGHFPGHLVDVGGMGTLSQSYQYEVCLTGDSRTGEFKFLNPVVPNLFLEE
SEEVEESPYCRSSFVVS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagagaagaacgctttcttaaacaaaggcaagtcttgcttctctttgttttt
ctgggtgggtctcttgctgggtccgggtctaagcgctattctgtggccgaggaaaaagag
aggggctttgtaatagccaatctagagaaggatctggggcttagtgtagaagaactggct
aaaaggagagctcaagctatctccaaagggaacatacagtattttcagctcagtcatcag
actggagatttgctcttggttgagagattggacagggaggagctttgcggctcgacagag
ccttgtgtgctgcactttcagatattgctgcataatcctttgcagtttattacaaatgag
ctcgaggtcatagatgtaaatgaccatgccccggagttctttgaaaacgcaatgcagctg
aaagtcctagaaagctccccgcctgggacagtgattcctttgggaaatgctgtagacttg
gatgtgggaagaaacggactccagaactacacgatctttcccaagtcacattttcgtgtt
cacacccgtcatcgtagagatggaagaaagtatccagagctagttctagacagagctctg
gatcgggaagagcagccggagctcagcttaactctcacagcgctggatggaggatccccg
cctcgttctggaactacccaggtccacatcctggtcttagacatcaatgataatgcccca
gagtttacacagtcactctatgaggttcaaattttagagaaaagccctgttggctctgtc
attaccactgtctctgcttctgacttagatatggaaaattttggtgcgatatcatacgaa
ttttttcatgcttctgaagaaattctcaaaacgtttcaactaaaccccactactggtaat
atacaactacttaagggtttggattatgaaacaattaatacttatgaggttgacatagag
gccaaggatggtggaggcctttcagggaaatgcacagttatagttcaggtacttgatgtg
aacgataacccaccagaactgacactgtcatcagttaacagtcttatccccgagaattcg
gcagagactgtggtggctgtattcagtgtttccgattcagactctggagataatggaaga
gtgatatgtttcatccagaacgatctccccttcatcctgaagccgtctgtagagaacttc
tatactctagcatctgaaggagttttggacagagagagcagagctgagtacaacatcacc
atcacggtctcagacctgggcacacccagactcacaacccagcacaccataacagtgcag
gtgtctgacatcaacgacaacgcccctgtcttcacccaaacctcctacaccatgttcatc
cgcgagaacaacagccctgccctgcacataggcaccatcagtgccacagactcagactca
ggctccaatgccctcatcacctactcgctgctgccgcctcacgacccacatctggccctc
gactcgctggtctccatcaactccgacaacggacagttgtttgcgctcagggcactggac
tatgagaccctgcaggctttcgagttccgcgtgggcgccacggaccgaggctcacccgcg
ctcagcagccaggctctggtgcgtgtggtggtgctggatgacaatgacaattcgcccttt
gtactctacccgctgcagaacgcctctgcgccctgcactgagctgctgcccagggctgcg
gaacctggctacctggtcaccaaggtggtggcagtggaccgcgactctggccagaatgcc
tggctgtcgttccagctgctcaaggccacggagcccgggctgttcagtgtatgggcacac
aatggcgaagtgcgcaccaccaggctactgagtgagcgcgatgtgcccaagcacaggcta
ctgctgctggtcaaggacaatggtgatcctccacgctctgccagtgtcactcttaatgtg
ctgctggtagacggcttctctcaaccctatctgcccttgcctgaagtggcgcgagactcc
atgcaaaacgacgtggacttgctcacattgtacttagtcatcgccttggcatctgtgtct
tcgctcttcctcttgtctgtggtgctgtttgttggggtgagactgtgcaggagggccagg
gcagcttctatgagtggctgctctgtgtctgagggacactttcctggccacctggtagac
gtcggcggtatggggaccctgtctcagagctaccagtatgaggtgtgtctgacaggagat
tctaggaccggtgagttcaaattcctgaatccagtggttccaaacctgtttctggaagaa
tctgaggaagttgaggaaagtccctactgtaggagtagctttgtagtcagctaa
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