Arvicanthis niloticus (African grass rat): 117719727
Help
Entry
117719727 CDS
T08817
Symbol
Dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117719727 (Dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117719727 (Dmxl1)
Membrane trafficking [BR:
anu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117719727 (Dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
117719727 (Dmxl1)
RAVE complex
117719727 (Dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
MIOS_WD40
Beta-prop_Vps41
ThsA_Macro
Motif
Other DBs
NCBI-GeneID:
117719727
NCBI-ProteinID:
XP_034373853
LinkDB
All DBs
Position
14:complement(38178115..38325941)
Genome browser
AA seq
3034 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFAVGSVGEQRFTAYASGCDIVILGSNFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNVISVFEPVNLPKKKKNLEFYSQWQKSGQFFLDSIAHNITWDP
AGNRLLTGSSCLQLWCNINSRKQTEDENPDKTDLNFGDWMCIWHCKTASQVHLMKFSPDG
EFFATAGKDDCLLKVWYNVENWRPAVTSPDKNSEKQSQGEIDFSFVYLAHPRAVNGFSWR
KTSKYMPRASVCNVLLTCCKDNVCRLWVQTFLPNDCLLYGNDCNHWCEPISLTNNFKRNA
SSKDRVQSALEVNLRPFRRGRSRSLALVAHTGYLPHQQDPHHVHRNTPLHANALCHFHIA
ASINPATDIPLLPSITSLSLSENEEKSGPFVVHWLNNKELHFTLSMEVFLQQLRKSFEQP
SSEASVEDSIQADVKSDEEMDDGVDDLKINHEKKELSEDKMLPSSSFTPLSSAAIDHQIE
VLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN
SLCKSIVMYACTKNVDLAIQQGKQKPTGLTRSTSMLISSGHSKSSNNLKLSIFTPNVMMI
SKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA
LRTPNVGNQKQAHDTVNIEECLTQQNKSNVDTSFQDPNAIYSELILWRVDPVGPLSFSGG
VSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAKK
LLYELSNPEISKYVGEVFNIISQQSTARPGCIIALDSITKLHGRKTQLLHVFQEDFILNN
LEKKRLGIDNMLLDSDSSRNGFSEKFYLVVIECTQDNRSLLRMWDLHLKSIPVSLDERID
TKISEASWLPEEHYSSSPEKIVSPFSQKFQACRANLQSTSKLSLFSEMVYSKELDLPEGV
EIISVKPSAGHLSSSSIYPVCSAPYLLATSCSDDKVRFWRCRVTNGESATSKNGKIDLVY
VWEEWPLLIEDGLQSNSSITVPGRPVEVSCAHTNRLAVAYKQPTCNSRSQEFVMYVSIFE
CESTGGSCWILEQTIHLDELSTVLDSGISIDSNLVAYNKQETYLVSKESITSNTKHLVHL
DWMSREDGSHILTVGIGSKLFMYGPMAGKVQEQTGKENQAFPLWDSTKIVPLSKFVLLRS
VDLVSSVEGAPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSYKQEPVISDSCNGSTPSI
LSLIKQSNSSSSGLHPPKKTLTRSMTSLAQKICGKKSTFDPSVDMEDSGLFEAAHVLSPT
LPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALNETESNHERRLRSLTISASGS
TTRDPQAFNKAENRDYTEIDSVPPLPLYALLAADDDSYYSSLEKTRSDSSLRKSKQLSKE
SYDELFQTSVLMSDNHMLEADEENVQPRVIDLSQYSPTYFGPEHAQVLSGHLLHSSLPGL
TRMEQMSLMALADTIATTSTEIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSLPAYR
AQLLHQGLSTGHFAWAFHSVAEEELLNMLPAMQKDDPTWSELRAMGVGWWVRNARILRRC
IEKVAKAAFHRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGHNFEEERWRKAA
LKNAFSLLGKQRFEHSAAFFLLGGCLKDAIEVCLEKLNDIQLALVIARLFESEFDKSATY
KSILRKKVLGIGSPVSELSSSNINAHHDPFLRSMAHWILEDYSAALETLIKQPVTEDEDQ
VMMSACNPVVFNFYNYLRTHPLLLRRHFGSSDTFSTHMALTGKSGLAGTINLSERRLFFT
TASAHLKAGCPMLALEVLSKMPKVCKKTKPFCRGSSFFMSKDSSPLKSDAREDKSSAIDW
SQSLINGFESSSEGSSERHSNSTFSFDWSQPSMVFQDDSLELKWDSDNDEENEDLPISMK
EIRPLQRKTVVKELDELSSYTDSLSTLDENDILNPSEDIIAVQLKFRACLKILTVELRTL
STGYEIDGGKLRYQLYHWLEKEVVALQRTCDFCSDAEQLQSTFSQSADESGSIEDADDLH
HQTKVNQLRESFQEKRQWLLKYQSLLRMFLSYCVLHGSHGGGLASVRMELILLLQESQQE
TAEPIFSNPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIINFDSPPHPDSQ
SNKVYVMHTLAASLSACIYQCLCGSHNYSSFQTNQFTGMVYQTVLLAHRHSLRTGSLDES
VTPNTSPAQWPGINCLIQLLNSSGEEAQSGLTVLLCEILTAVYLSLFIHGLATHSSNELF
RIVAHPLNEKMWSAVFGGGAHVPSKVQTKALSVEGEKQNKHISPPKVSGRESSPVSSSSV
NQEPLAVKEKFIPPELSIWDYFIAKPFLPPSQSRAEYDSEESLESDDDEDDDDDTLTSDL
QLHEHSNSNSFSWSLMRLAMVQLVLNNLKTFYPFAGHDLAELPVSSPLCHAVLKTLQCWE
QVLLRRLEIHGGPPQNYISSHTSEENVSAGPAILRHKALLEPTNTPFKSKNHLALSVKRL
WQYLVKQEEIQETFIRNIFTKKRCLNESLEDSSETIKNSMMEEPNINKIEADLGYPGGKA
RIIHKESDIITAFAVNKANRNCIAIASSHDVQELDVSGILATQIYTWVDDDTETETKGSE
DFLVIHARDDLSAVQGSTPYTHSNPGTPINMPWLGSTQTGRGASVMLKKAINNVRRMTSH
PTLPYYLTGAQDGSVRMFEWGHSQQITCFRPGGNSRITRMRFNYQGNKFGIVDADGYLSL
YQTNWKCCPVTGSMPKPYLAWQCHNKTANDFVFISSSSLIATAGLSSDNRNICLWDTLVA
PANSLVHAFTCHDSGATVLAYAPKHQLLISGGRKGFTCVFDLRQRQQRQLFQSHDSPVKA
IAIDPTEEYFVTGSAEGNIKIWSLSTFSLLHTFINEHARQSIFRNIGTGVMQIETGPANH
IFSCGADGTMKMRILPDQFSPLNEVLKKDVKFML
NT seq
9105 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgaccggcgcggtgaaccccggcgaccactgcttcgcggtg
ggcagcgtcggcgagcagcgcttcacggcctatgcatctggatgtgacatcgtaatactg
ggaagtaattttgaaagattacagatcatcccaggcgctaaacatggaaatattcaagtg
ggatgtgtagactgttcaatgcaacaaggcaagattgcagcatcctatggaaacgttatc
tctgtttttgaaccagtcaatctgccgaaaaaaaagaaaaatttggaattttatagtcag
tggcagaaaagtggccaattttttctggactcaatagcacataatataacctgggatcct
gcaggtaatcgtcttttaactggttccagctgtctgcagctttggtgtaatattaactca
agaaagcaaactgaagatgaaaatccagataaaacggatctaaacttcggagattggatg
tgcatttggcattgcaaaactgcttcccaggtccacctaatgaaattttcaccagatgga
gaatttttcgccactgctggaaaggatgattgtcttctaaaagtatggtataatgtagaa
aactggcgaccagctgttacctctccagataaaaattcagaaaaacaatcccaaggagaa
attgatttttcttttgtgtatctggcccatccacgagctgtaaatggattttcctggcgt
aaaacaagcaaatatatgccgagggcttctgtatgtaatgtactattgacttgctgtaaa
gataatgtatgtcgtctttgggtacaaacatttttaccaaatgattgcttgctgtatgga
aatgactgcaaccactggtgtgaaccaattagtttaacaaataatttcaagaggaatgct
tccagtaaagaccgagttcaaagtgctctagaagtaaatctgaggcctttccgtagaggt
cggagtagatcacttgctcttgtagcacatactggctatctgccacatcagcaggatcct
caccatgtccacaggaacacgccactgcatgccaatgcactttgtcactttcatattgca
gccagcatcaacccagccacagatatcccacttcttccatctattacatctttgagttta
agtgaaaatgaagagaagtctggaccttttgtggtacactggttaaacaataaagagttg
cattttactttgtccatggaagtcttcttacagcaacttagaaaaagttttgaacagccc
tcatctgaggccagtgtagaagactctattcaggcagatgtaaaatctgatgaagaaatg
gatgatggtgttgatgatttaaaaataaatcatgaaaagaaggaattgagtgaagataaa
atgttaccaagctcaagttttacaccattatcgtcagctgccatcgatcatcagattgaa
gtgcttctatctgaatggagtaaaaacgcagacatgcttttcagtattcatcccatggat
gggtctttactagtttggcatgtcgattggctggatgaataccagcctggtatgtttcgt
caagttcaggtgtcctttgtttccagaattcctgtagctttccccacaggtgatgcaaac
tctctttgtaaaagcatagtaatgtacgcctgtaccaagaatgttgacttagctattcaa
caaggaaaacagaaacctactggcctcactcgttccacatcaatgcttatctcttctggt
cacagtaaatcatcgaataacttaaaattaagtatttttacccctaatgttatgatgatt
tcaaagcatgctgatggttctttgaatcagtggctggttagttttgctgaggaatctgct
ttttctacagtgcttagtatttctcacaaatccagatattgtggtcatcgttttcatctt
aatgatttagcttgccactcagtattacctttattactgacaacatcacatcataatgca
ttaaggacaccaaatgttggtaaccaaaagcaagctcatgacactgtaaatattgaagaa
tgtttgacacagcaaaataaaagcaacgttgatacatcatttcaagatcccaatgcaatt
tatagtgagcttattctttggagagttgatccagttgggccactatctttttctggagga
gtatctgaacttgcccgaattaattctcttcatgtttctgccttttccaatgttgcatgg
ctccctactctcatacccagttactgtctaggtgcatactgcaactctcctagtgcatgc
tttgtagctagtgatggacaatatctgaggttatatgaagcagttatcgatgccaagaaa
cttttatatgagctttccaaccctgaaatttctaaatatgttggtgaagtgtttaacatc
atcagtcagcaatcaacagccagaccaggatgcattattgcattagattctattaccaag
cttcatggcagaaaaacccagttgcttcatgtttttcaagaagatttcattttgaataac
cttgagaagaaacgtctgggaatagataacatgttattggattcagacagttcacgtaat
ggattttctgaaaagttctacctggttgtgatagagtgtactcaagacaaccgttcacta
ttacgcatgtgggatttacacttaaagtcgattcctgtctcactggatgaaagaatagac
acaaaaatatcagaagctagttggctaccagaagaacattattcgtcttctccagagaag
attgtatctccattttctcagaaattccaggcttgcagagctaatctgcagagcaccagc
aagttgtctcttttttctgaaatggtgtacagcaaagagttggatttgccagaaggagtt
gagataataagtgttaagccctcagcaggacacttgagttcgtcttccatatatcctgtt
tgcagtgctccttacttattggcaacttcatgctcagatgataaagtaagattttggcgc
tgcagagtaacaaatggagaatcagctacatcaaagaatggaaaaatagatcttgtgtat
gtttgggaagaatggccattactcattgaagatggacttcagagcaatagtagtataact
gtacctggtaggcctgtagaagtgagctgtgcacatacaaaccgtttagcagtagcctat
aaacagcccacttgtaatagtagatctcaggaatttgtgatgtatgtgagtatctttgaa
tgtgagtctacaggaggttcatgttggatccttgaacagacaattcatttagatgagtta
agtacagtgttggattctggaattagtattgacagcaatttagtggcttataataaacag
gagacgtatttagtcagtaaagaaagtattacatcaaacacaaaacatttggttcactta
gattggatgtctagagaagatggttctcatatcttaactgtaggaattggctcaaaactt
tttatgtatggacccatggctggcaaggtacaagaacagactgggaaggagaaccaggca
tttcctctctgggacagtactaaaattgtacctctttctaaatttgtactgttaagaagt
gtggacttggtttcttctgtagaaggtgccccaccttttcctgtttctttatcatgggtc
cgggatggcatccttgtggtaggaatggattgtgaaatgcatgtatattcccaatggcag
ccatcttataaacaagaacctgttatatcagattcatgcaatggaagtactccatctata
ctaagtttaataaaacaaagtaactcatcaagttctgggctacatcctccaaagaaaact
cttactcgatccatgaccagtcttgcacagaaaatctgtggaaagaaaagtacatttgac
ccttcagtggatatggaagattccggtctttttgaagcagctcatgtactttctccaact
ttacctcagtaccatcccttgcagcttttggaactcatggatcttggcaaagtccggaga
gccaaggccatcttgtcacatcttgtcaaatgcattgctggggaagttgtggctctgaat
gaaactgaatctaatcatgagcgccgccttagatctctcaccatcagtgctagtggaagt
accaccagagacccccaggcattcaacaaagctgaaaacagagactacacagagatagac
tctgtccctccacttcctttatatgccttacttgcagcagatgatgatagctattactct
tctttggaaaagactaggagtgacagttccttaaggaaatcaaaacagttatcaaaagaa
agttatgatgaactttttcagacttcagttctgatgtctgataatcacatgttagaggca
gatgaagaaaatgtacagcccagagtcattgacctttcacaatacagtccaacttacttt
ggtcctgagcatgctcaggttctttctggccatttacttcattctagtttaccagggctc
accaggatggaacagatgtctttgatggccttagcagatacaattgcaactacaagcact
gaaattggagaaagtagagacagaagtcaaggtggagaaactctagatgagtgcggatta
aagtttcttttggctgttcgactccatacgtttcttacaacttcccttccagcctaccga
gctcaactccttcaccaaggtctttctactggtcattttgcttgggcatttcactcagta
gccgaggaagaactgctgaatatgttgccagccatgcagaaagatgatccaacttggtct
gaactgagagcaatgggtgtagggtggtgggttcgcaatgctcgcatcttgcgcagatgc
atagaaaaagtagccaaagcagcctttcatagaaataatgatcctttagatgctgcaatt
ttttaccttgcaatgaaaaaaaaagctgtgatttggggattatatagatctcaaaaagac
accaaaatgacacagttttttgggcacaattttgaggaagagaggtggcgtaaagcagct
ttgaaaaatgccttttctttattaggcaagcaaaggtttgaacattctgcagcatttttt
cttctaggtggttgcctcaaggatgcaattgaggtatgtcttgaaaaactgaatgacatt
cagttggctcttgtaatagcaagactatttgagtctgaatttgataaatcagcaacatac
aagtctattttacgcaaaaaagttttgggaattggttctccagtcagtgagctcagttca
tcgaatataaatgcacatcatgacccctttcttcggagtatggcacattggattttagaa
gattatagtgctgctctggaaacattaataaagcaaccagttacagaggatgaagatcaa
gtcatgatgtcagcctgtaatcctgtagtttttaatttctacaattacctaagaacacat
cctcttttgctaaggcgtcattttggatcatctgatacattttcaacacacatggcttta
acaggaaaaagtggactggcaggaacaattaatctaagtgaaagaagattattttttact
actgctagcgctcacctaaaagctggctgcccaatgttggctttggaagtattgtcaaag
atgcccaaagtctgtaagaaaacaaaacccttttgtagaggatctagtttttttatgagt
aaagattcttctccactaaaatcggatgccagagaagacaagtcttctgctattgactgg
tcacagtcactgataaatggttttgaatcttcttcagagggttcttcagagaggcactca
aactctaccttttcttttgattggagccaaccgagtatggtatttcaagatgactctttg
gagttgaaatgggatagtgataatgatgaagaaaatgaagatctccctatttcaatgaaa
gaaataagacctttgcagagaaagacagttgttaaagaattagacgaattgagcagttac
acagactccttaagcacattagatgaaaatgacattttaaatccatcagaagatataatt
gctgttcaactaaaatttagagcatgtttaaagattctcacagtagaacttcgtacttta
tctactggctatgaaatagatggtgggaaattgcgttaccagctctaccactggcttgaa
aaagaggtagtagctcttcagaggacttgtgacttttgctcagatgcagaacaactgcag
tccacatttagccaaagtgcagatgaatctggatcaattgaggatgctgatgatttgcat
caccaaacaaaagtgaaccaactgagagaaagtttccaggaaaaaaggcagtggctcttg
aaatatcagtcactcttaagaatgtttcttagttactgtgtgcttcatggctctcatggt
gggggtcttgcatcagtgagaatggaattaattttacttttgcaagagtctcagcaggaa
acagcagaaccaatattttctaaccctctgtcagaacaaacttccgtgcctcttctcttt
gcttgtacagctagtgccaaaacagtagttgccaatccattattgcaccttagtaattta
acacatgatattctacatgccataataaattttgattcaccgccacatcctgatagccaa
agcaataaagtatatgtaatgcatactttagcagcctcactttctgcttgtatttatcag
tgcctttgtggtagtcataactacagttcatttcaaacaaatcagtttactggaatggtg
tatcagacagtgcttcttgcccatcgacattctctgagaacaggaagtttagatgaatca
gtaactcccaacacatcaccagctcaatggccaggaataaattgtctgattcaacttttg
aattcttccggtgaagaagctcagtcaggacttacagtcttgctttgtgaaattctcaca
gcagtgtatcttagcctgttcattcatgggctagcaacacactctagtaatgagctattt
cggattgtagcccaccccctaaatgaaaaaatgtggtctgcagtatttggtggaggagct
catgttcccagcaaagtacagacaaaagctttatctgttgaaggagaaaaacaaaacaaa
catattagtccaccaaaagtgtctggcagagaatcttctcctgtatcctcttcctctgta
aatcaggagccacttgcagtcaaggagaagttcatcccacctgaactaagcatctgggac
tatttcatagccaagccttttctcccaccttcccaaagtagagcagaatatgattctgag
gagagtctagaaagtgatgacgatgaagatgatgatgacgatactttgacttctgatctc
caactccatgagcactcaaattcaaattcattcagttggtctttgatgagattggctatg
gtccagttggtgctcaacaatttgaagactttctatccctttgcaggtcatgatcttgca
gaactaccagttagttcacctctttgtcatgcagttctaaaaactcttcagtgctgggaa
caggttcttctccggcgacttgaaatccatggtggaccacctcaaaactatatctcaagt
cacacttctgaagagaatgtgtctgcaggccctgcaatactccgtcacaaagctttacta
gaacctacaaacactcctttcaaatccaaaaatcatctcgcactatcagtgaagaggctt
tggcagtacttggtaaaacaggaagaaattcaagaaacttttatcagaaatatattcaca
aagaaacgatgtctaaatgagtcattagaggacagcagtgaaaccatcaaaaattctatg
atggaggagccaaacatcaataagatagaagcagatctgggatatcctggaggtaaagca
agaattattcataaggaatctgatatcattactgcctttgctgttaataaggcaaataga
aattgcatagcaattgcctccagccatgatgtacaagaactggatgtttctggaattctg
gccacacagatatatacttgggtggatgatgatacagaaacagaaaccaaaggatcagaa
gacttcttggttatacatgctcgtgatgacctatcagctgtccagggttcaactccatat
acacacagcaaccctggcactccaatcaacatgccatggcttggaagtacacagacaggc
agaggagcatcagtgatgcttaagaaagccattaataatgttagaagaatgacatcacat
ccaactcttccttactatctgacaggagctcaagatggaagtgtcagaatgtttgaatgg
ggccattctcagcaaataacctgttttcgacctggtggcaattcaagaattacaagaatg
agatttaactatcagggaaataagtttggaattgttgatgctgatggatatttaagctta
taccaaacaaactggaaatgttgcccagttactggaagcatgcctaagccatatctggct
tggcagtgtcataacaagacagccaatgattttgtcttcattagttcctcctctctgata
gctacagctggtctttcaagtgacaatagaaacatatgtctatgggacacgcttgtagca
cctgccaatagtttagtccatgcttttacctgccatgatagtggagccacagttttagca
tatgctcccaaacatcagctactaatatcaggtggcagaaaaggtttcacatgtgtattt
gaccttcgacaacggcaacagaggcagctttttcagagccatgattcccctgttaaagct
attgctattgatccaactgaagagtactttgttacaggatctgcagaaggcaatataaag
atttggagtctttctacctttagtcttctccatacttttatcaatgaacatgctcgacag
tctatttttagaaatattggaactggagtcatgcagattgagacaggaccagcaaatcac
attttctcttgtggagctgatggaacaatgaaaatgaggattctgccggatcagtttagc
cctttaaatgaggtgttgaaaaaggatgtgaaatttatgctataa
DBGET
integrated database retrieval system
