Arvicanthis niloticus (African grass rat): 117719809
Help
Entry
117719809 CDS
T08817
Symbol
Ercc3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03022
Basal transcription factors
anu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117719809 (Ercc3)
09124 Replication and repair
03420 Nucleotide excision repair
117719809 (Ercc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117719809 (Ercc3)
03400 DNA repair and recombination proteins [BR:
anu03400
]
117719809 (Ercc3)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117719809 (Ercc3)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117719809 (Ercc3)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117719809 (Ercc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
117719809
NCBI-ProteinID:
XP_034374015
LinkDB
All DBs
Position
14:complement(55073117..55100708)
Genome browser
AA seq
782 aa
AA seq
DB search
MGKRDRVDRDKKKSKKRQYEEEEEDEDDAPGNDSQEAVPSAAGKQVDESSTKVDEYGAKD
YRQQMPLKGDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA
YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESS
HPDVIQHLLQDPVIRECRLRNAEGEATELITETFTSKSAISKTAEGSGGPSTSQGVDAQA
KSDIPKDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCICLEYPLLAEYDFRND
SLNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRS
WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELAFSTKEEQQQLLQKVLAAT
DLDAEEEVVAGEFGSRSGQASRRFGTMSSLSGADDTVYMEYHSSRSKGSTKHVHPLFKRF
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaagagatcgagtggaccgcgacaagaagaaatccaagaagaggcagtatgaa
gaggaagaagaagacgaagacgacgctcctgggaacgattctcaggaggcggtgccctca
gccgcagggaaacaggtggacgagtccagcaccaaagtggatgagtatggagcaaaggac
tacagacagcagatgccactaaagggtgaccatacctccaggcccctctgggtggctcct
gatggccacattttcttggaagccttctctccagtttacaaatatgcccaagacttcctg
gtggcaattgcagagccagtgtgccggcctactcatgtacatgagtacaagctaaccgcc
tactccctctatgcagctgtcagtgttgggctgcaaaccagtgacatcactgagtacctc
agaaagctcagtaagactggagttcctgatgggattatccagtttattaagctgtgcact
gtcagctatggaaaagttaagctggtcctgaagcacaacaggtactttgttgaaagttcc
caccctgatgtcatccagcatcttcttcaagacccagtaatccgggaatgtcgcttgagg
aatgcggagggggaggctacagaactcatcacagagacttttacaagcaaatctgctatt
tctaagacggcagaaggcagtggcgggccttctacttctcagggggtagatgcacaggcc
aaatctgacatccccaaagacctgtttgatttttatgagcaaatggacaaggatgaggag
gaggaggaagagacacagacagtatcctttgaagttaagcaggaaatgattgaggagctc
cagaagcgctgcatctgcctagagtaccctctgttggcagagtatgacttccggaatgac
tctctcaaccctgatatcaacatcgacctgaagcccacagctgtgctcagaccctatcag
gagaagagcctgcggaagatgtttgggaatggacgtgcacgctcaggagtcattgttctt
ccctgtggtgctgggaagtccctggttggcgtgactgccgcatgcaccgttagaaagcgc
tgtctggtcctgggcaactcggctgtgtctgtggagcagtggaaagcccagtttaagatg
tggtcaaccatcgatgacagccagatctgccgtttcacctcggatgccaaggacaagccc
attggctgctccattgccattagcacttactctatgctgggccacaccaccaaaaggtct
tgggaggctgagagagtcatggaatggctaaaaacccaggagtggggcctcatgatcctt
gacgaggtgcacaccattccagccaagatgtttcggcgggtgctgaccattgtgcaggca
cactgtaagcttggtttgactgcaacccttgtccgggaagatgacaaaattgttgactta
aatttcctgattgggcccaagctttatgaagccaattggatggagctgcagaacaatggg
tacattgccaaagtgcagtgtgctgaggtttggtgcccgatgtctcctgagttctaccga
gagtatgtagcgatcaaaacaaagaaacgaatcctgttgtacaccatgaatcccaacaag
ttcagagcctgccagtttctcatcaagtttcatgaaaggaggaatgacaagattattgtc
tttgctgacaatgtattcgccttgaaggaatatgccattcggctgaacaaaccttacatc
tatgggcccacgtcccagggagaaaggatgcagattctccagaacttcaagcacaacccc
aaaatcaacaccatcttcatctccaaggttggtgacacatcctttgatctgccagaagca
aatgtcctcattcagatctcttcccatggtggctccagacggcaggaagcccagagactg
ggacgggtactcagggccaagaaagggatggttgccgaggagtacaacgcctttttctac
tccctggtgtcccaggacacacaggaaatggcttattccaccaagcgacagagattcttg
gtagatcaaggttacagctttaaggtaatcacaaagctcgccggcatggaggaagaggag
ctggcattctccaccaaagaggagcagcagcagctcctgcagaaggtcctggcagccacc
gacctggatgcagaggaggaagtggtggctggagagtttggctctagatctggccaggca
tcccggcgctttggcaccatgagctctctgtccggggcagatgacactgtgtatatggag
taccactcatcccgaagcaaaggctccaccaagcacgtgcacccccttttcaaacgtttc
aggaagtga
DBGET
integrated database retrieval system
