Arvicanthis niloticus (African grass rat): 117719874
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Entry
117719874 CDS
T08817
Symbol
Afg3l2
Name
(RefSeq) AFG3-like protein 2
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
117719874 (Afg3l2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117719874 (Afg3l2)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
anu03110
]
117719874 (Afg3l2)
Peptidases and inhibitors [BR:
anu01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
117719874 (Afg3l2)
Chaperones and folding catalysts [BR:
anu03110
]
Other chaperones and cochaperones
AAA proteases
117719874 (Afg3l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_22
AAA_5
RuvB_N
AAA_16
TIP49
nSTAND3
AAA_2
AAA_14
AAA_17
AAA_28
gpW
IstB_IS21
AAA_33
Mg_chelatase
LonB_AAA-LID
Motif
Other DBs
NCBI-GeneID:
117719874
NCBI-ProteinID:
XP_034374157
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All DBs
Position
14:21689017..21735391
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AA seq
801 aa
AA seq
DB search
MAHRCLLLWGRGGCRRGLPPLLAPSGCLGPGRRPCLRTLYQYASVQTANSRSSLLRDVIA
AYQRFCSRPPKGFEKYFPNGKNGKKASEPKEAVGEKKESQLSGPQPSGGAGGGGGKRRGK
KEDSHWWSRFQKGDFPWDDKDFRLYFLWTTLFWGGVMIYFLIKSSGREITWKDFVNNYLS
KGVVDRLEVVNKRFVRVAFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRV
PVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAKVLKD
EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKAT
AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF
GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIK
GRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAIN
EKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK
GLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQI
VQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISDAYKRTVALLTEKKA
DVEKVALLLLEKEVLDKNDMVKLLGPRPFTEKSTYEEFVEGTGSLDEDTSLPEGLQDWNK
EREKEEKKKEKEEPLNEKVVS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccgctgcctgctgctgtggggccggggcggctgccgtcgcggccttcctccc
ctgctggcgcccagcggctgcctgggtcccggccggcggccctgcctccgtacgctttat
cagtacgcttcggtccaaacagcaaacagcagaagttctcttctgagggatgtaattgct
gcttatcaaagattctgttctcgacctcccaaaggatttgaaaaatactttcctaatggg
aaaaatggaaaaaaggccagtgaacctaaggaagctgttggagaaaaaaaagaatcacaa
ctctccggcccccagccttctggaggtgcaggtggtgggggagggaagcgccgaggcaaa
aaagaagattctcactggtggtccaggttccagaagggtgactttccatgggatgacaag
gatttcaggctgtactttctctggactactcttttttggggtggagtcatgatttacttc
ctgatcaagagttctgggagagaaatcacatggaaagactttgtcaataactatctttct
aaaggagtggtggacagactagaagttgtcaacaagcgttttgttcgtgtggcctttaca
ccaggaaaaacaccggttgatgggcaatacgtctggtttaatattggcagtgtcgacaca
tttgagcggaatctggagactttgcagcaagaattgggcatagaaggagagaatcgcgtg
cctgtggtttacattgctgaaagtgatggctccttcctgctgagcatgctacccacagtg
ctcattattgcttttctgctctacaccataagaagagggcccgctggcattggtcggacc
ggccggggaatgggtggactcttcagtgttggggagaccacagccaaggtcttaaaggac
gagatagatgtgaagtttaaagatgtcgctggctgtgaggaggccaagctagaaataatg
gaatttgtgaacttcttgaaaaacccaaagcagtatcaagacctaggagcaaaaatccca
aagggtgccattctcaccggtcccccaggtactgggaagacactgttagctaaggccaca
gctggagaagccaatgttccctttatcactgtcagtggatctgagtttctggagatgttt
gtcggtgttggtccagccagagtccgagacttatttgcccttgctcggaagaatgcgcct
tgtattctcttcattgatgagattgatgctgtgggaagaaaacgtggcagaggcaacttc
ggcgggcagagtgagcaggagaacacactcaatcagctgcttgtggagatggatggcttc
aacacaaccaccaatgtggtcatcctggcaggcacaaatcgaccagacatcctggatcca
gctctgttgagaccgggccgatttgacaggcagatctttattggacccccagacataaaa
ggacgagcctcaatcttcaaagttcaccttcgaccattgaaactagacagtgccttggaa
aaagataaattggccagaaaactggcgtccttaactccagggttttcaggcgctgatgtt
gccaacgtctgcaatgaagctgctttgattgctgcaagacacctttcagatgccattaat
gagaagcacttcgaacaagccattgagcgagtgattggaggcttggagaaaaaaacccaa
gttctgcagccggaggagaagaagactgtggcttaccatgaagcaggccacgcagtcgcc
ggctggtatctggagcatgcagacccactcttaaaggtgtccatcattcctcgtgggaag
gggctgggctatgctcagtacttacccaaggagcagtatctgtacacaaaggagcagctt
ctggacaggatgtgcatgactctgggaggccgtgtctctgaggagatcttctttggaaga
attacaaccggtgcccaggatgacttgaggaaggttacccagagtgcctatgcccagatt
gttcagtttggcatgaacgaaaaagtggggcagatctcctttgacctcccacggcaggga
gacatggtgttagagaagccttacagtgaagccacggcgaggatgatagacgatgaagtg
aggattctcatcagcgatgcctataaaagaactgtggctcttctcacggagaaaaaggct
gacgtggagaaggttgctctcctgctgttagaaaaagaagtgctagacaagaacgacatg
gttaaacttctgggccccagaccatttacagagaaatccacatatgaagaatttgtggaa
ggcaccggcagcttagacgaggacacttctcttcctgaaggccttcaggattggaacaag
gagcgggagaaggaggagaagaagaaggagaaggaggagcccctgaatgagaaggttgtc
agctag
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