Arvicanthis niloticus (African grass rat): 117719889
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Entry
117719889 CDS
T08817
Symbol
Mex3c
Name
(RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117719889 (Mex3c)
04121 Ubiquitin system [BR:
anu04121
]
117719889 (Mex3c)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117719889 (Mex3c)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117719889 (Mex3c)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117719889 (Mex3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
Prok-RING_4
zf-C3HC4
RING_XB3-XBAT31
KH_2
KH_DEAH11_2nd
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
117719889
NCBI-ProteinID:
XP_034374182
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Position
14:complement(15958637..15978496)
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AA seq
649 aa
AA seq
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MPSGSSAALALAAAPAPLPQPPPLPPPAGGPELEGDGLLLRERLAALGLDDPSPAEPCAP
ALRAAAAAAQCQARRAAGLAPEEPAPPGRLATSETAELELEVDDEEGEEAELDGELLEEE
ELEEAEEEDRPSLLLLSPPAATASQTQPIPGGPLGSVLLPAAGFDAREAAAAAAGVLYGG
DDAQGMMAAMLSHAYGPGGGGAAAAALNGEQAALLRRKSVNTTECVPVPSSEHVAEIVGR
QGCKIKALRAKTNTYIKTPVRGEEPIFVVTGRKEDVAMAKREILSAAEHFSMIRASRNKN
GPALGGLSCSPNLPGQTTVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPV
FEVTGMPENVDRAREEIEMHIAMRTGNYIELNEENDFHYNGTDVSFEGGTLSSAWLSSNP
VPPSRARMMSNYRNDSSSSLGSGSTDSYFGSNRLADFSPTSPFSTGNFWFGDTLPSVGSE
DLAVDSPAFDSLPTSAQTIWTPFEPVNPLSGFGSDPSGNMKTQRRGSQPSTPRLSPTFPE
SIEHPLARRVRSDPPSTGNHVGLPIYIPAFSNGTNSYSSSNGGSTSSSPPESRRKHDCVI
CFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAIQIHS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcggcagctccgcggccctggccctggcggcggccccggcccccctgccgcag
ccgcctccgctgccaccgcccgcgggaggcccggagctcgagggggacgggctgctgctg
agggaacgcctggccgcgctaggcctcgacgaccccagcccggcggagccctgcgctccg
gcgctcagggccgcggcggcggcggcgcagtgccaggcccggcgggcggccggactggct
ccggaggagcccgctccgcccggccgcctcgcgacctccgagacggcggagctggagctg
gaggtggacgacgaggagggggaggaagcggagctggacggagaactgctggaggaggag
gagctggaggaggctgaggaggaggaccggccgtcgctgctgctgctgtcgccgcccgcg
gctaccgcctcccagacccagccgatcccgggcgggcccctggggtccgtgctgctgccg
gccgcgggcttcgatgcccgggaggcggcggccgcggcggcgggggtgctgtacggaggg
gacgatgcccagggcatgatggcggcgatgctgtcccacgcctacggccccggcggcggc
ggagccgccgctgccgccctgaacggagagcaagcggccctgctgagaaggaagagcgtc
aacaccaccgagtgcgtcccggtgcccagttccgagcatgtcgctgagattgtcggacgc
cagggttgtaaaattaaagcactgagagccaagacaaacacatatatcaagacaccggtt
cgtggtgaagaacccatttttgttgtcactggacggaaagaagatgttgccatggccaaa
agggaaatcctctcagctgcagagcacttctctatgatccgtgcatctcgaaacaaaaat
ggccctgcactgggagggttatcatgtagtcctaatctgcctggtcaaaccacagtccaa
gtcagggtcccctatcgtgtggtagggctggtggttggaccaaaaggagcaacgattaag
agaattcagcaacagacccacacatacatagttactccgagcagagataaggagccagtc
tttgaagtcacagggatgcccgaaaatgttgaccgagcacgagaagaaatagaaatgcat
atcgccatgcgcacagggaactacatagagctcaatgaagagaacgatttccattacaac
ggtaccgacgtgagctttgaaggtggcactcttagctctgcatggctctcttccaatcca
gttcctccaagccgagcgagaatgatgtccaactatcgaaatgatagttctagttctctc
ggaagtggttccactgattcctattttggaagcaataggctagctgactttagtccaaca
agcccatttagcacagggaacttttggtttggagatacactaccatctgtaggctcagaa
gatcttgcagtagattctcctgcctttgactctctaccaacatctgctcaaactatctgg
actccatttgaaccagttaacccactctctggctttgggagtgatccttctggtaacatg
aagactcagcgtagaggaagtcagccatcaactcctcgtctgtctcctacatttcctgag
agcatagaacacccacttgctcgaagggttaggagcgacccacctagtacaggcaaccat
gttggccttccaatatacatccctgctttttctaatggtaccaatagttactcctcttcc
aacggtggttccacctctagctcacctccagaatcaagaagaaagcacgactgtgtgatt
tgctttgagaatgaagttattgctgccctagttccatgtggccacaacctcttctgcatg
gaatgtgccaacaagatctgtgaaaagagaacgccatcatgtccagtttgccagacagct
gttactcaggcaatccaaattcactcttaa
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