Arvicanthis niloticus (African grass rat): 117720021
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Entry
117720021 CDS
T08817
Symbol
Rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117720021 (Rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117720021 (Rbm22)
Spliceosome [BR:
anu03041
]
Complex B
Other components
Prp19-related factors
117720021 (Rbm22)
Complex C
117720021 (Rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
zf-CCCH_4
RRM_3
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
117720021
NCBI-ProteinID:
XP_034374388
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All DBs
Position
14:complement(28351217..28363440)
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AA seq
420 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITEADLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttctctaggttccaacacctacaacaggcagaactgggaggacgcggacttc
cccattctgtgtcagacgtgtcttggagaaaacccttatatacgaatgaccaaagaaaaa
tatggaaaagaatgtaaaatctgtgccaggccattcacagtgtttcgctggtgtcctggg
gtccgcatgcgcttcaagaagactgaagtgtgccaaacctgcagtaaattgaagaatgtt
tgtcagacctgcctgttagacctagagtatggcctacccatccaggttcgtgatgcagga
ttgtcatttaaagatgacatgcctaaatcagatgtcaataaagaatattacacccaaaat
atggaaagagaaatttctaactctgatggaacacgaccagttggaatgctaggaaaagct
acatccaccagtgacatgctactcaaattggcccggaccacaccatactacaaaaggaat
cggccccacatttgttccttctgggtgaaaggagaatgtaagcgaggagaggagtgccca
tacagacatgagaagcctacagatccagatgaccctcttgctgatcagaacataaaagac
cggtactatgggattaatgaccccgtggctgacaagcttctaaaacgggcttcgaccatg
cctcggcttgacccaccagaggacaagacgatcaccacactgtacgtgggtggtctggga
gacaccattactgaagcagatctcagaaatcatttctaccagttcggagagatccgcacg
atcactgttgtgcagaggcagcagtgtgccttcatccagtttgccaccaggcaggctgct
gaggtagccgctgagaagtcctttaacaagctcattgtgaatggccgaagactcaatgtc
aaatggggaagatcacaagcagccagaggaaaagaaaaagagaaggatggaaccacagac
tctgggatcaagctagaacctgtaccaggactgcctggagctctgcctccacctcctgca
gcagaagaggaggcatctgccaactacttcaacctgcccccaagtggtcctccagcagtg
gtgaacattgccctgcccccaccccctgggattgccccaccgccacccccaggttttgga
ccacatatgttccacccaatgggaccgccgcctcctttcatgagagctccaggaccaatc
cactacccttctcaggaccctcagagaatgggagctcacgctggaaaacacagcagcccc
tag
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