Arvicanthis niloticus (African grass rat): 117720351
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Entry
117720351 CDS
T08817
Symbol
Smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03082
ATP-dependent chromatin remodeling
anu04714
Thermogenesis
anu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117720351 (Smarcd3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
117720351 (Smarcd3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
117720351 (Smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117720351 (Smarcd3)
03036 Chromosome and associated proteins [BR:
anu03036
]
117720351 (Smarcd3)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117720351 (Smarcd3)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117720351 (Smarcd3)
PBAF complex
117720351 (Smarcd3)
GBAF(ncBAF) complex
117720351 (Smarcd3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
117720351
NCBI-ProteinID:
XP_034374669
LinkDB
All DBs
Position
15:complement(1055041..1086130)
Genome browser
AA seq
536 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQAQGQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDVRPGPVPVTFPQPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHR
TPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALW
QYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVD
PSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDF
MLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKVT
EALEHAASLPFSPKRSLASHLATVFAAAYAQYLSTTLHLHAVVSWLPDSFGEGLPR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccgaatgccccaccagggg
gcgcccatgggccccccgggctccccgtacatgggcagccccgcagtacgacccggcctg
gcccccgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccgggcagagccag
gcacagggccagggccagcccgtgcccaccgccccagcgcggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggattcgagagctggtccccgagtcccag
gcttacatggacctcctagcatttgagaggaaactggatcaaaccatcatgcggaagcgg
gtggacatccaggaggccctgaagaggcccatgaagcaaaagcgaaagctgcgcctttat
atctccaatacttttaaccctgcgaagcccgatgccgaagattctgatggcagcattgcc
tcctgggagctgcgggtggaggggaagctcttggatgatgtacgtcctggcccagtccct
gtcactttcccacagcccagtaagcagaagaggaagttttcttccttcttcaagagtttg
gtcattgagttggacaaagacctttatggcccagacaaccaccttgttgagtggcaccgg
acacccaccacccaggagacagatgggttccaagtgaagagaccaggggacttgagtgtg
cgctgcaccctgctcctaatgctggactatcagcctccccagttcaaactggacccccgc
ttagcccggctgctggggttgcatacacagagccgctcagccattgtccaggcactgtgg
cagtatgtgaagaccaacaggctacaggactcccatgacaaggaatacatcaatggagac
aagtatttccagcagatttttgactgtccccgcctgaagttttctgagatcccccagcgc
ctcactgccctgctgctgccccctgacccaattgtgatcaaccatgtcatcagcgtggac
ccatcagaccagaagaagacagcgtgctatgacattgatgtggaggtggaggaaccactg
aaggggcagatgagcagcttcctcctgtccacagccaaccagcaggagatcagtgctctg
gacagtaagatccatgagacgattgagtccataaaccagctcaagatccagagggacttc
atgctaagtttctccagagaccccaaaggctacgtccaagacctgctccgctcccagagc
cgtgatctcaaggtgatgacagatgtggctggtaaccctgaggaagagcgccgggctgag
ttctaccaccagccctggtcccaggaagccgtcagccgctacttctactgtaaggtaacg
gaggccctggaacatgcagcttcccttcccttcagtcctaagagaagtctcgcctctcac
ctggcaacagtctttgctgctgcctatgcccaatacctgtccaccaccctacatctccat
gcagtagtctcctggctcccagactctttcggggaagggctgccacgatag
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