Arvicanthis niloticus (African grass rat): 117720517
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Entry
117720517 CDS
T08817
Symbol
Mkrn1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117720517 (Mkrn1)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117720517 (Mkrn1)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117720517 (Mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_2
zf-C3HC4
zf-RING_UBOX
zf-CCCH_3
zf-RING_2
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
zf-CCCH_PARP12
zf-C3HC4_2
zf-CCCH_RBM22
Motif
Other DBs
NCBI-GeneID:
117720517
NCBI-ProteinID:
XP_034374880
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All DBs
Position
15:24121434..24142194
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AA seq
481 aa
AA seq
DB search
MAEAAAPGTTATTSGAGAAAAAVAAASLTSIPTVAAPSPGAGGGGGGSDGSGGGWTKQVT
CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKPLKQEEVTAT
DLSAKPSLAASSSLSSGVGSLAEMNPGEAESRNPNFPTVGAGSEDWVNAIEFVPGQPYCG
RTAPSCTEAPLQGSVTKGESEKEPATVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCG
LQVLHPMDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFG
ILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQK
YKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSSRYRAQRRNHFW
ELIEERENNPFDNDEEEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFHDELEDFYDLD
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctcccggaacaacagccacaacatcaggagcaggagcggcagcg
gcggcggtggcagcggcctccctcacctctatccccacagtcgctgccccgtccccgggg
gcgggaggagggggcggcggcagcgacggcagcggtggcggctggacgaaacaggtcacc
tgcagatattttatgcatggggtttgtaaggaaggagataactgtcgatactctcatgac
ctctctgacagtccatatggtgtagtgtgcaagtattttcaaagagggtactgtgtttat
ggagatcgctgcagatacgaacacagcaagccactgaaacaggaagaagtgactgctaca
gatctgagtgcaaaaccatcccttgctgcttcctcaagcctctcttctggcgttggatca
cttgctgaaatgaatccgggcgaagctgagtcacgaaacccaaactttccaactgtagga
gcaggttcagaggactgggtgaatgccattgagtttgtccctgggcagccctactgtggc
cgtactgccccttcctgcactgaagcacccctgcagggctcagtgaccaagggagagtca
gagaaggagccagctacggtggagacaaagaagcagctttgcccctatgctgcagtggga
gagtgtcgctatggggaaaactgtgtgtatctccacggagactcctgtgacatgtgtggc
ctgcaggtcctacacccaatggatgctgcccagaggtcacagcacataaaatcttgcatt
gaggcccatgagaaggacatggagctgtcttttgctgttcagcgcagcaaggacatggtg
tgtgggatctgcatggaggttgtctatgagaaagccaaccccagcgagcggcgctttggg
atcctctccaactgcaaccacacctactgtctcaagtgtattcgcaagtggagaagtgct
aaacagtttgagagcaagatcataaagtcctgccctgaatgccggatcacatctaacttt
gtcattccaagtgagtactgggtggaggagaaagaagagaagcagaaactcattcagaaa
tacaaggaggccatgagcaacaaggcgtgcaggtattttgatgaaggacgtgggagctgc
ccatttggagggaactgtttttacaagcatgcgtaccctgatggccgtagagaggagcca
cagagacagaaagtgggaacatcaagcagataccgggcccaacgaaggaaccacttctgg
gagctcattgaggagagagagaacaacccctttgacaacgacgaagaggaggttgtcacc
tttgagctgggcgagatgttgcttatgcttttggctgcaggtggggacgacgagctgaca
gactctgaggacgagtgggacttgtttcacgatgagctggaggatttttatgacttggat
ctatag
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