Arvicanthis niloticus (African grass rat): 117720537
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Entry
117720537 CDS
T08817
Symbol
Tra2a
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
KO
K12897
transformer-2 protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03040
Spliceosome
anu04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117720537 (Tra2a)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
117720537 (Tra2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
anu01009
]
117720537 (Tra2a)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117720537 (Tra2a)
Protein phosphatases and associated proteins [BR:
anu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117720537 (Tra2a)
Spliceosome [BR:
anu03041
]
Common components
Common spliceosomal components
SR proteins
117720537 (Tra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
117720537
NCBI-ProteinID:
XP_034374923
EnsemblRapid:
ENSANLG00005019752
LinkDB
All DBs
Position
15:14959222..14979474
Genome browser
AA seq
282 aa
AA seq
DB search
MSDVEENNFEGRESRSQSKSPTGTPARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRS
RRHSHRRYTRSRSHSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTGSRANPDPNTCLG
VFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANG
MELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGGGRRRDSYYDR
GYDRGYDRYEDYDYRYRRRSPSPYYSRYRSRSRSRSYSPRRY
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtagaggaaaacaacttcgagggcagagagtctcgctctcagtcaaaatct
ccaacgggaactcctgctcgtgtaaaatcagagagcaggtcaggatctcgtagtccatca
agggtttccaaacattctgaatcccattctcgatcaagatcaaaatccaggtcaaggtca
cggaggcattctcatagacgctacactcgatccaggtcacactctcacaggagacgatct
cggagtaggtcctatacaccagagtataggaggcggaggagccggagtcactctccaatg
tctaatcgcagaaggcacactggcagcagggcaaacccagatcctaacacttgcctggga
gtatttggcctcagtttgtatacaacagagagagaccttcgtgaagtattctcccgatac
ggacctctgagtggggttaatgtggtttatgatcagcggactgggaggtcgcgtggattt
gcttttgtgtattttgagaggatagatgactctaaggaggctatggaaagagccaatggg
atggagctggatgggagaagaatccgtgtggattattctatcactaagagagcgcacaca
cctacaccgggcatttacatgggcagaccaactcatagcggtggtggaggtggcggagga
ggaggtggtggtggcggcggtggtggcggtggcagacgacgagattcttactatgataga
ggatatgatcggggctatgacagatatgaagattatgattaccggtacagaagaaggtcg
ccctctccttactacagccgctacaggtcacgatcaagatcccgttcctatagcccaaga
cgctattga
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integrated database retrieval system
