Arvicanthis niloticus (African grass rat): 117720548
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Entry
117720548 CDS
T08817
Symbol
Ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117720548 (Ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117720548 (Ube3c)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117720548 (Ube3c)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
HECT type E3
117720548 (Ube3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
117720548
NCBI-ProteinID:
XP_034374944
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All DBs
Position
15:5461507..5570870
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AA seq
1083 aa
AA seq
DB search
MFSFEGDFKTRPKVSLGGASKKEEKASLLHRTQEERRKREEERRRLKNAVIIQSFIRGYR
DRKQQYFIQRSAFDQCADSAQPGGTFCLADGPSLTLLVRQLLFFYKQSEDSKRLIWLYQN
LIKHSSLFVKQLDGSERLTCLFQIKRLMSLCCRLLQNCSDDSLNVALPMRMLEVFSSENT
YLPVLQDSSYVVSVIEQVLHYMVHSGYYRSLYLLINNKLPSSIEYSDLSRVPIAKILLEN
VLKPLHFTYSSCPEGARHQVFSAFTEEFLGAPFTDQIFHFIIPALADAHTVFPYEPFLNA
LLLLESRSSKWSSGVPWLFYFVLTVGENYLGALSEDGLLVYLQVLQTFLSQLPASPTGAG
HPDSTSDSEDDNEETDQPTSPEDGRVSAPYITEECLRKLDTKQQTNTLLNLVWRDSASEE
VFTRMASICHTLMVQHRMMVPKVRLLYSLAFNARFLRHLWFLISSMTTQMITGSMVPLLQ
VISRGSPMSFEDSSRIIPLFYLFSSLFSHSLISIHDNEFFGDPIEVVGQRQSSMMPFTLE
ELILLSRCLRDACLGIIKLAYPETKPEVREEYVTAFQSIGVTTNSEMQRCIQMEQKRWVQ
LFKVITNLVKMLKSRDTRRNFCPPNHWLSEQEDIKADKVTQLYVPASRHVWRFRRMGRIG
PLQSTLEVGLESPPLSVSEERQLAILTELPFVVPFEERVKIFQRLIYADKQEVQGDGPFL
DGINVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNEL
LKSGFNPNQGFFKTTNEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFA
GFFLSKLLGTSADVDIHHLASLDPEVYRNLLFLKSYEEDVEELGLNFTVVNNDLGEAQVV
ELKFGGKDIPVTGANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVSLEWLRMFDQQEI
QVLISGAQVPVSLEDLKSFTNYSGGYSADHPVIKIFWRVVEGFTDEEKRKLLKFVTSCSR
PPLLGFKELYPAFCIHNGGSDLERLPTASTCMNLLKLPEFYDEALLRSKLLYAIECAAGF
ELS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcttcgaaggcgacttcaagacaaggcccaaagtgtctctcggtggcgcgagc
aagaaggaagaaaaggcttctcttttacatcgcactcaggaagaaagacgcaagagagag
gaagaaagacgaagattgaaaaatgcagtaatcatccagtcatttattcgaggatataga
gacaggaaacaacaatattttatccaaagaagtgcatttgaccaatgcgccgactcggct
cagcctggaggcaccttctgccttgctgatggtcccagccttaccctcttggtaaggcag
ctgctgttcttttacaaacagagtgaagactccaaacgtctgatatggctttatcagaac
ttaattaagcacagctctctgtttgtcaagcagttggatggatcagagagactgacatgc
ttatttcaaataaagaggttgatgagcctctgttgcaggttgctgcaaaactgtagtgat
gacagtttgaatgttgcacttccaatgcgaatgcttgaggtgttttcatctgagaataca
tacttgcctgttttacaagattctagctatgtggtgtcagtgattgaacaagttttgcac
tacatggttcacagtggatattatagatctctctacttgttgattaataacaagcttcca
tcaagtattgaatattctgacttatctcgagttcctatagcaaaaattttgctggagaat
gtcctaaaaccattgcactttacgtacagctcctgtcctgaaggtgcaaggcatcaagtt
ttctcagccttcacagaggagtttctgggggcaccttttaccgatcagatttttcatttc
atcattccggctttagcagatgcacacactgtgttcccttatgagccctttctgaatgcg
ttattgttacttgagagtcgaagttcaaagtggagtagtggagtgccatggctcttctat
tttgttttaactgttggcgagaattatttaggagcactctctgaggatggtctactggtt
tatctgcaagtgcttcagaccttcctctctcaactacctgcttcacccaccggtgcaggc
catcctgattccaccagtgactctgaggacgataatgaggagactgaccaacccactagc
cctgaggatggcagggtctcggccccatacattactgaagagtgtctgagaaaactagac
acgaagcagcagaccaacaccctcctgaacctggtctggagggactcagccagtgaggag
gtcttcacaaggatggcttctatctgccacacattgatggtgcagcaccgaatgatggtg
cccaaagtcaggcttctctacagtttagccttcaatgccaggtttttgaggcacctttgg
tttctcatctcttctatgacaacacagatgatcacagggtctatggtgccattgcttcag
gtgatatcaaggggttcgcccatgtcttttgaagattctagtcgaatcatcccactcttt
tacctcttcagctccttgttcagtcattcgctgatttccatacatgacaatgaatttttt
ggtgaccccatagaagttgtaggtcagagacaatcatccatgatgcctttcactctggag
gagttaatcctgctgtcacgatgccttcgagatgcctgcttagggatcatcaagttagcg
tatccggaaacaaagccagaagttcgggaggaatatgtcaccgcatttcagagtattggg
gttactactaactctgagatgcagcggtgcatacaaatggaacagaagcgatgggttcag
ttgttcaaggttatcactaacctagtgaaaatgctgaagtccagagacacgaggagaaat
ttctgtcctccaaatcactggctgtcagaacaagaggatatcaaagcagataaagttact
cagctctacgtacctgcatcgagacatgtgtggagattccggaggatgggcaggattggc
ccactgcagtccaccctggaggtgggtctggagtccccaccgctatctgtgtctgaggaa
cgacagcttgccatcctgacagaactaccttttgtggttccatttgaggaacgagtgaag
atctttcagaggttgatttatgctgataagcaagaagttcaaggagatggtccatttctg
gatggaatcaatgtcactataaggagaaattatatttatgaagatgcttatgacaaactt
tctccagaaaatgaacctgatttgaaaaaacggatccgggtacacttgctcaatgcccac
ggcctggatgaagctggcatcgatggtggtggtattttcagagaatttttaaatgaacta
ctgaaatctggatttaaccccaaccaagggttctttaagactactaatgaagggcttcta
taccccaacccagctgctcagatgcttgtgggagattcttttgcaaggcattactacttc
ctaggcagaatgcttggaaaggctctgtatgaaaacatgttggtggagctaccctttgct
ggctttttcctgtccaagcttctgggaaccagcgcagatgttgacatccaccatcttgcc
tcattggacccagaagtctacaggaacctgcttttcctcaagagctatgaggaggatgtg
gaggagctgggactgaacttcactgtggtgaacaatgacctgggagaagcacaggtggtt
gaactaaaatttggtgggaaagacatcccagtaactggggccaaccgaattgcctacatc
cacctggtggctgactaccggctgaacaagcagatccgaccgcactgcctagctttccgc
cagggcctagccaacgtagtgagcctagagtggctccgaatgtttgaccaacaggaaatt
caggtattaatttctggtgcacaagttcctgtaagtctggaagacctaaaatcctttaca
aactattcagggggctattctgctgatcatcctgtcattaaaatcttttggagagttgta
gaaggtttcactgatgaagagaagcgcaagttgctcaagttcgtaacaagctgctctcgc
cctcctctcctgggtttcaaggagctgtaccctgcgttttgcattcacaatggaggctct
gaccttgaacggctccctacagccagcacctgtatgaacctgctgaagctcccagagttt
tacgatgaagccctgctgcgaagcaagctgctgtatgccatcgagtgcgctgctggcttc
gagctgagctga
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