Arvicanthis niloticus (African grass rat): 117720574
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Entry
117720574 CDS
T08817
Symbol
Trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
anu01001
]
117720574 (Trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117720574 (Trim24)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117720574 (Trim24)
Protein kinases [BR:
anu01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
117720574 (Trim24)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117720574 (Trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_2
zf-C3HC4_2
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
117720574
NCBI-ProteinID:
XP_034375004
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All DBs
Position
15:complement(25579898..25676427)
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AA seq
1050 aa
AA seq
DB search
MEVAVEKAAAPAGAPAAAPPSGENEAESRQGPDSESGGEASRLNLLDTCAVCHQNIQSRV
PKLLPCLHSFCQRCLPAPQRYLMLTAPALGSAETPPPAPVPVPAPAPGSPAGGPSPFATQ
VGVIRCPVCSQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEANGFCVECVE
WLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCETCDKL
TCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLITKLMEKTKYIKYTGNQIQNRIIEVNQN
QKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVAGLSKQLEHVMH
FSKWAVSSGSSTALLYSKRLITYRLRHLLRARCDASPVTNNTIQFHCDPSFWAQNIINLG
SLVIEDKETQPQMPKQNPVVEQSSQPPGGLPSNQLSKFPTQISLAQLRLQHMQQQVMAQR
QQVQRRPAPVGLPNPRMQGPIQQPSISHQHPPPRLINFQNHSPKPNGPVLPPYPQQLRYP
PSQNIPPRQTIKPNPLQMAFLAQQAIKQWQISSGQAPPTTASSSSSTPSSPTITSAAGYD
GKAFSSPMIDLSAPVGGSYNLPSLPDIDCSSTIMLDNIARKDTNVDHGQPRPPSNRTVQS
PNSSVPSPGLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKPAGADSTHKVPVVMLEPI
RIKQENSGPPENYDFPVVIVKQESDEDSRPQNTNYPRSILTSLLLNSNQSSASEETVLRS
DAPDSTGDQPGLHQENSSNGKSEWPDASQKSPVHVGETRKEDDPNEDWCAVCQNGGELLC
CEKCPKVFHLTCHVPTLTNFPSGEWICTFCRDLSKPEVEYDCDAPSHHSDKRKSEGLTKL
TPIDKRKCERLLLFLYCHEMSLAFQDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYCMYT
KPEDFVADFRLIFQNCAEFNEPDSEVANAGIKLESYFEELLKNLYPEKRFPKLEFRPEAE
DCKFSDDSDDDFVQPRKKRLKSSEDRQLLK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggctgtagagaaggcggcggctccggccggggcccccgcagcggcgccgccg
agcggggagaatgaggccgagagccggcagggcccggactcggagagcggcggcgaggcg
tcccggctcaacctgttggacacttgcgccgtgtgccaccagaacatccagagccgggtg
cccaagctgctgccctgcctgcactcattctgccaacgctgcttgcccgcgccccagcgc
tacctcatgctgacggcgcccgcgctgggctcagcagagacccctccacccgcacccgtc
cccgtccccgcccccgccccgggctctccggccggtggtccttcgccattcgctacccaa
gttggagtcattcgatgcccagtttgcagccaagagtgtgctgagagacacatcatagac
aacttttttgtgaaggacaccactgaggttcccagtagtacagtagaaaagtctaatcag
gtgtgtacgagctgtgaagacaatgcagaagctaatgggttttgtgtagagtgtgttgaa
tggctctgcaagacatgtattagagctcaccagagggtgaagttcacaaaagaccacaca
gtcaggcagaaagaagaagtatctccagaggcagttggtgtaaccagtcagcgaccagtg
ttttgtccgttccacaaaaaagagcagttgaaactttactgtgaaacatgtgataaactg
acatgtcgagactgccagctgctagaacacaaagagcacagataccaatttatagaggaa
gcttttcagaatcaaaaagtgatcatagatactctaatcaccaaactgatggaaaaaaca
aaatatataaagtatactggaaatcagattcaaaataggataattgaagtcaaccaaaac
caaaagcaggtggaacaggatattaaagttgccatcttcacattaatggtggagataaac
aaaaaagggaaagctctgctgcaccagcttgagagtcttgcaaaggaccatcgaatgaaa
cttatgcagcaacagcaggaagtggctgggctttctaagcagttagagcacgtcatgcat
ttttctaaatgggctgtttccagtggcagcagcacagccttgctatacagcaagcggctg
attacatacaggttacggcaccttcttcgtgcaaggtgtgatgcttctcctgtgaccaac
aacaccatccagtttcactgtgatcctagtttctgggctcaaaatattatcaacttgggt
tctttagtaatcgaggataaagagacccagccacaaatgcctaagcagaatcctgtcgtg
gaacagagttcacagccaccaggtggtttaccttccaaccagttatccaagttcccaaca
cagatcagcctagctcagttacgactccagcatatgcagcaacaggtaatggctcagagg
caacaggtgcaacggaggccagcacctgtgggtttaccaaaccctagaatgcaggggccc
atccagcagccttccatctctcatcagcatccaccaccacgcttgataaactttcagaat
catagcccaaagcccaatggaccagttcttcctccttatcctcagcagctgagataccca
ccaagccagaatataccaccacggcagacaataaagcccaaccccctgcagatggctttt
ttggctcaacaggccataaaacagtggcagatcagcagtggacaggctccgcccacaact
gccagcagctcctcctccactccttccagtcccacaatcacaagtgcagctgggtatgat
gggaaagcttttagttcacccatgattgatctgagtgcaccagtaggagggtcttacaac
cttccttctcttccagatattgattgttcaagtactatcatgttggacaatattgcaagg
aaagacacaaatgtagatcacggccagccaagacctccatcaaacagaacggtgcagtca
ccaaattcgtcagtgccatctccaggccttgcagggcctgttactatgactagcgtccat
cccccaatacgttcacctagtgcctccagcgttgggagccgaggaagctctggctcttcc
agcaaaccagcaggagctgactctactcacaaggtcccagtagtcatgttggagccaatt
agaataaaacaagaaaacagtggaccacctgaaaattatgattttcctgttgttatagta
aaacaagaatcagatgaagactctagacctcaaaatactaactatccaagaagcatactt
acctccctcctcctaaatagtaatcagagctccgcttctgaggaaaccgtattacgatct
gatgcgcctgatagtacaggagatcaacctggacttcatcaagaaaattcctcaaatgga
aagtctgagtggccggatgcctcccagaagtcccctgtgcatgtcggagagacaaggaag
gaggacgaccccaatgaagactggtgtgctgtttgtcaaaatggtggggaactcctgtgc
tgtgagaaatgtcctaaagtattccatcttacatgtcatgtgcccacattgacaaacttc
ccgagtggagaatggatttgtactttctgccgagacttatctaagccagaagttgaatat
gattgtgatgctcccagtcaccactcagataaaaggaaaagtgaaggccttactaaatta
actccaatagataaaaggaaatgtgaacgcctgcttctgtttctttactgccatgaaatg
agcctggctttccaagaccctgtccctctaactgtgcctgattattataaaataattaaa
aacccaatggacttgtcaaccatcaagaaaagacttcaggaggattattgcatgtataca
aagcctgaagattttgtagctgattttagattgatctttcaaaactgtgctgaattcaat
gagcctgattctgaagtagccaatgctggtataaaacttgaaagctattttgaagaactt
ctaaagaatctttatccagaaaaaagatttcctaagctagaattcaggcctgaagcagaa
gactgtaagttcagtgacgactcagatgatgactttgtacagccccggaagaagcgcctc
aagagctcggaggaccgccagctgcttaagtaa
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