Arvicanthis niloticus (African grass rat): 117720594
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Entry
117720594 CDS
T08817
Symbol
Abcb1
Name
(RefSeq) ATP-dependent translocase ABCB1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu02010
ABC transporters
anu04976
Bile secretion
anu05206
MicroRNAs in cancer
anu05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117720594 (Abcb1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
117720594 (Abcb1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
117720594 (Abcb1)
09162 Cancer: specific types
05226 Gastric cancer
117720594 (Abcb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117720594 (Abcb1)
04147 Exosome [BR:
anu04147
]
117720594 (Abcb1)
04090 CD molecules [BR:
anu04090
]
117720594 (Abcb1)
Enzymes [BR:
anu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117720594 (Abcb1)
Transporters [BR:
anu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117720594 (Abcb1)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117720594 (Abcb1)
CD molecules [BR:
anu04090
]
Proteins
117720594 (Abcb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
RsgA_GTPase
Zeta_toxin
AAA
AAA_5
G-alpha
AAA_29
AAA_14
APS_kinase
AAA_7
AAA_30
nSTAND1
DUF815
AAA_15
NTPase_1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
117720594
NCBI-ProteinID:
XP_034375053
LinkDB
All DBs
Position
15:61834740..61995206
Genome browser
AA seq
1277 aa
AA seq
DB search
MMELEEDLNGSTDKNFSKMGKKSKKEKKEKKPAVSVLTMFRYAGWLDRLYMLVGTLAAII
HGVALPLMMLVFGDMTDSFANVGNFPPNMTNISYYNNSDVFAQLEDEMTTYAYYYTGIGA
GVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKIN
EGIGDKIGMFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKE
LHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRLGIKKAITANISMGAAF
LLIYASYALAFWYGTSLVISKEYSIGQVLTVFFAVLIGAFSVGQASPNIEAFANARGAAY
EVFKIIDNKPSIDSYSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTV
ALVGNSGCGKSTTVQLIQRLYDPTEGVVSIDGQDIRTINVRYLREIIGVVSQEPVLFATT
IAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIAR
ALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDG
GVIVEQGSHDELMREKGIYFKLVMTQTAGNEIELGNEACESKDGIDNLDISSKDLGSSLI
RRRSTRRSIRGPHDQDRKLSIKEALDADVPPASFWRILKLNSTEWPYFVVGIICAIINGG
LQPAFSIIFSKVVGVFTRYDPPEIQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEI
LTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIAQNIANL
GTGIIISLIYGWQLTLLLLAIVPIIAIAGVIEMKMLSGQALKDKKELEGSGKIATEAIEN
FRTVVSLTREQKFEMMYAQSLQVPYRNALKKAHVFGITFSFTQAMMYFSYAACFRFGAYL
VAQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSASHIIRIIEKVPEIDSYST
EGLKPSVLEGNVKFNGVMFNYPTRPNIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLL
ERFYDPMAGSVLLDGKEVKQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRVVSHE
EIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEAT
SALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQ
KGIYFTMVSVQAGAKRS
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacttgaagaggaccttaatggaagcacagacaagaacttctcaaagatgggc
aaaaagagtaaaaaggagaagaaagagaagaaaccagcagtcagtgtgcttacaatgttt
cgctatgctggttggctcgacaggttgtacatgctggtgggaactttggctgccattatc
cacggagttgcactcccactcatgatgctggtctttggagacatgacagatagctttgca
aatgtaggaaacttccctccaaacatgactaatataagttactacaataattcagatgtc
tttgcccagctggaagatgaaatgaccacgtacgcctactattacacggggattggtgct
ggtgtgctcatagttgcctacatccaagtttcattttggtgcctggcagctggaagacaa
atacacaagattaggcagaagttttttcatgctataatgaatcaggagataggctggttt
gacgtgcatgacgttggggagctcaacacacggctcacagatgatgtctccaaaattaat
gaaggaattggtgacaagattggaatgttctttcaggcaatggcaacattttttggtggt
tttataataggatttactcgtggctggaagctaacccttgtgattttggccatcagccct
gttcttggactgtcagctggtatttgggcaaagatattatcttcatttactgataaggaa
ctccatgcctatgcaaaagctggagcagttgctgaagaggtcttagcagccatcagaact
gtgattgcatttggtggacaaaagaaggaacttgaaaggtacaataacaatttggaggaa
gctaaaaggctgggaataaaaaaagctatcacggctaacatctccatgggagcagctttt
ctgctgatctacgcatcatatgctctggcattctggtatgggacttccttggtcatctca
aaagaatactctattggacaagtgctcactgttttctttgctgtactaatcggagcattc
agtgttggacaggcatctccaaatatcgaagcctttgccaacgcaagaggagcagcttat
gaagtcttcaaaataattgataataagcccagtatagacagctactcaaagagtgggcac
aaaccagacaacatacaaggaaatctggaattcaaaaatattcacttcagttacccatct
cgaaaagaagttcagatcttgaagggccttaacctgaaggtgaagagcggacagacggtg
gccctggtcggcaacagtggctgcggcaaaagcacgactgtgcagctgatacagaggctc
tacgaccccacagagggcgtggtcagcatcgacggacaggacatcaggaccatcaatgtg
aggtatctgcgggaaatcattggcgtggtgagtcaggaacctgtgctgtttgccaccacg
atcgcagaaaacattcgctatggccgagaagatgtcaccatggatgagatagagaaagct
gtcaaggaagccaatgcctatgacttcatcatgaaactgccccacaaatttgacaccctg
gttggtgagagaggggcacagctgagtgggggacagaaacagagaatcgctattgctcgc
gcgctggtccgcaaccccaagatccttttgttggacgaggccacctcagccctggataca
gaaagtgaagctgtggtccaggccgctctggataaggccagagaaggccggaccaccata
gtgatagctcaccgcttgtctacagtccggaatgctgacgtcatcgctgggtttgatggt
ggagtcatcgtggagcaaggaagccatgatgagctcatgagagagaagggcatttacttc
aaacttgtcatgacacagacagcaggaaatgaaattgaactaggaaatgaagcttgtgaa
tctaaggatggaattgataatttagacatatcttcaaaagatttgggatccagtctaata
agaagaagatcaactcgcagaagcatccgtggaccacatgaccaagacaggaaacttagt
atcaaagaggccctggatgccgatgtacctccagcttccttttggcggatcctgaagttg
aattcgactgaatggccttattttgtggttggtataatttgtgccataataaatggaggc
ttgcaaccagcattctctataatattttcaaaggttgtaggggtttttacaaggtatgac
ccccctgaaatccaacggcagaatagcaacttgttttccttattgtttctgatccttggg
atcatttcattcattacattttttcttcagggcttcacatttggcaaagctggagagatc
ctcaccaagcgactccgatacatggttttcaaatccatgctgagacaggatgtgagctgg
tttgatgaccctaaaaacaccacaggagcactgaccaccaggctcgccaacgatgctgct
caagtgaaaggggctacagggtctcggcttgctgttattgcccagaacatagcaaatctt
ggaacaggaattatcatatccctaatctatggctggcagttgacgcttttactcttagca
attgtacccatcattgctatagcaggagtgattgagatgaaaatgttgtctggacaagca
ctgaaagataagaaggaactagaaggttctgggaagattgctacagaagccattgaaaac
ttccgcactgttgtctctttgactcgggagcagaagtttgaaatgatgtatgcccagagc
ttgcaggtaccatacagaaatgctttgaagaaagcacatgtctttgggataacgttctcc
ttcacccaggccatgatgtatttttcctatgctgcttgtttccggtttggtgcctatttg
gtagcacaacaactcatgacttttgaaaatgttctgttagtattctcagctattgtcttt
ggtgccatggcagttgggcaggtcagttcattcgctcctgactacgcaaaagccaaagtg
tcagcatcccacatcatcaggatcattgagaaagtccctgagattgacagctacagcacc
gagggcctaaagcctagtgtattagaaggcaatgtgaaatttaatggagtcatgttcaac
tatcccacccgacccaacatcccagtgcttcaggggctgagcctcgaggtgaagaagggc
cagacgctggccctggtgggcagcagtggctgtgggaagagcacagtggtccagctgctc
gagcgcttctacgaccccatggctggatcagtgctcctagatggcaaagaagtaaagcaa
ctgaatgtccagtggctccgagctcacctgggcattgtgtcccaggagcccatcctgttt
gactgcagcatcgctgagaacatcgcctatggagacaacagccgggtcgtgtctcatgag
gagattgtgagggccgccaaggaggccaacatccaccagttcatcgactcgctgcctgat
aaatacaacaccagagtaggagacaaaggaactcagctgtcgggtgggcagaagcagcgc
atcgccatcgcacgcgccctcgtcagacagcctcacattttacttctggatgaagcaaca
tcagctctggatacagagagtgaaaaggttgtccaggaagcgctggacaaagccagggaa
ggccgcacctgcattgtgattgcacaccgcctgtccaccatccagaacgcagacttgatc
gtggtgattcagaatggcaaggtcaaggagcatggtacccaccagcagctgctggcccag
aaagggatctatttcacaatggttagtgtgcaggctggagcaaagcgctcatga
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