Arvicanthis niloticus (African grass rat): 117720684
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Entry
117720684 CDS
T08817
Symbol
Samd9
Name
(RefSeq) sterile alpha motif domain-containing protein 9
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117720684 (Samd9)
Membrane trafficking [BR:
anu04131
]
Endosome - Lysosome transport
Others
Others
117720684 (Samd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SLFN_AlbA_2
SAM_PNT
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
117720684
NCBI-ProteinID:
XP_034375203
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All DBs
Position
15:56758016..56779390
Genome browser
AA seq
1596 aa
AA seq
DB search
MAETLNLPEATDDWTKEDVNLWLESHRIDQKHRDILMAQDVSGAVLKWLNKKHLVEMGIT
HGPAIQIEELFKELQKTSSKHFTQTPKKTKGSKNISKTQTESRETSKQNQRAEENSREAD
SSAVSPEGNSHKADAPTASPRAKGTKSEKHELVGDRTVQQDKQSSPGPTCIAYPFNEFSN
PYRYKLHFILQPETGPLNLIDPIHEFKALTNTETATKEDIKMKFSNEVFRFASACMNSRT
NGTIHFGVKDKPQGEIVGVELTTVTKDALIDHFNLTIAQYFEVHQVQQAKKCIREPRFVE
VLLPNSTPSNRFVIEVDIIPQYSECKEDYFQIKMQCLKNQAWQQAPNYSVFVRNGPRSKD
IIGNKADFKTFKLDLKALSESRKEAEKKSKVKLNENNREGQKLIELLTGNKDLLDNSYYE
WYILVTNKCHPHQTKHVDFLKEIKWFAVLEFDPESESNGVVKAFKRSRVANLHVPSQYIE
GETRVSEKIFSLNLYQQPSWIFCNGRLDLESDKYKPLDPISWQRERASEVRRLISFLTRD
DIMPRGKFLVVFLLLSSVEDPRDPLIETFCAFYQDLKGMENILCICVHPKIYQVWKDLLE
ARLSRQQDELSSQSISTLNLAEINGTILKLKSLTQSSKRFLPSVGSSTVLLKKEEEIMTA
LEVLCENECEGTLLEKDKEKMLEFKTSKEEDFYRGGKVSWWNFYFSSENYSSSFVKRDKY
AKLEKKIQEWADSSQPVCAKIIHLYHHPGCGGTTLAMHILWELRKKFRCAVLKNKTEDFS
EIGEQVTNLITYGATSHQEYLPVLLLVDDFEEQDNVYLLQTSIQTAVANKHIRYEKPLVI
ILNCTRSQNPEKSAKMSDSVALVQQLSPKEQRAFELKLTEIKEQHKNFEDFYSFMIMKTN
FNKEYIENVVRNILKGQNVTTKEAKLFAFLALLNAFVPDTTISLSQCEHFLGISNKKAFW
GTEKFEDKMGTYSTILIKSEVIECGSYCGVRIIHHLIATLSLEELKRSYNLNKSKIVMDM
LTENLFYNTGIGKDKFSQDVQTLLLTRQRNEHEGETGNWFSPFIEALHKDEGNDAVKAVL
CEATRRFNPNAFICQALARHFYLKEKDFEKALHWAKQARKIEPNNSYISDTLGQVYKSKI
RWWIDDNMKNGIISVNELTELLDLAEHASNAFKDSQRQTEDREYEGKERLYQKSKRRYDT
YNIAGYQGEIEVGLYTIQMLQLIPFFNNKNELSKRDMVKFISGNGDIPGDLSEFKSALKN
FIPYLTNLQSSLKKSFDFFDDYFVLLKPRNNIKQYEEAKNRRKVAGYFKKYVEIFGPLEE
LENQNFRSKLSLPLQVERTRRSLEALKADKFSGLLEYLIKSPEDAVSAMEDIVNKYTFLL
EQSVIKTQQKEKQNFILASIVLSCINPTSKLIKPIKKLKEQLREILQPIALTYQFPEPYF
LASLLFWPENQQLDQDSKQMEKYARALENASRGQYKRMYRTKQPIAYFFLGKGNSRNRLI
HKGKIDKNFEKVSDINSWWHTGKVWEEEKVQDLLVRLQGRVESNSLYIEYGINEKITIPI
TPTHLGQLRSGQSIEKVSFYLGFSIGGLLAYDIKIV
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacactcaaccttccagaagccacagatgactggacaaaagaggatgtaaac
ctgtggctagaaagtcacagaattgaccaaaagcacagggatatcttgatggcacaagat
gtcagtggagcagtcttgaagtggttaaataaaaaacatcttgttgaaatgggcataacc
cacgggccagctatccaaatagaagagctattcaaagaattgcagaaaacatcctcaaaa
cattttactcagacacctaagaagacaaaaggcagtaagaatatttctaaaacccagaca
gaaagtagagagacttcaaagcaaaaccaaagagctgaagagaactcacgggaggctgat
tcctctgcagtgagtccagaagggaactcacataaagctgatgctcctacagcaagtcca
cgggctaaaggtactaaatcagaaaaacatgagctggtgggagatagaacagttcaacag
gataagcagtcatctccagggccaacatgcattgcatatcctttcaatgaattcagtaat
ccgtaccgttacaaattacatttcatcctacagcctgaaacaggaccactcaatctcatt
gacccaatacatgaattcaaagccctgacaaacacagagacagccacaaaagaggacata
aagatgaaatttagcaatgaagtcttccgatttgcttcagcttgtatgaactcacgtact
aatggcaccattcatttcggagtcaaagacaaaccccaaggagagattgttggcgtggag
ctcaccactgtcactaaagatgccctcattgaccacttcaatctgactatagctcaatat
tttgaggtccatcaagtccaacaagcaaagaagtgcattcgagagccaagatttgtggaa
gttttactgccaaatagtactccatctaacagatttgttattgaagtagatatcattcca
cagtactcagaatgtaaagaagactacttccaaatcaaaatgcaatgtttaaagaatcaa
gcatggcaacaagctccaaactactcagtctttgtgagaaatggacccagaagtaaggac
atcatagggaataaagctgatttcaaaacttttaaattagacttaaaagcactgtcagaa
tctaggaaagaagcagaaaaaaaatctaaagtaaaactaaatgaaaacaacagagagggg
caaaagctaattgagctgttgacaggaaataaggatctgttagataactcatactacgag
tggtacattcttgtaacaaataaatgtcatccacatcagaccaaacatgtagatttcctg
aaggaaattaaatggtttgctgtattagagtttgatcctgaatctgagagcaatggtgtg
gtcaaggctttcaaaagaagccgagtagcaaacctccacgttccaagccaatatatagaa
ggagaaaccagagtcagtgagaagattttcagtctgaatctttaccaacaacccagctgg
attttctgcaatggcaggttagacttagagagtgacaaatacaaacccttagatccaata
tcctggcaaagagagcgagcttctgaagtcaggagactgatttcatttcttacacgtgat
gacataatgccacgagggaagtttctggtagtgtttttattactctcttctgtggaagac
ccaagagacccccttattgagactttctgtgctttttatcaagatctcaaaggaatggaa
aatatactgtgtatttgtgtacatccaaagatatatcaggtatggaaagacctacttgaa
gcaagattatcaagacagcaagatgagttatcaagccaaagcatttctactttaaatctt
gcagagataaatggcactattcttaaattaaaatctttaactcagtcttcaaagcgattc
ttgccatctgttggttcgtctactgtccttctgaaaaaggaagaagaaattatgactgcc
ttggaagttctctgtgaaaatgaatgtgaaggtacactcttggagaaagataaagagaaa
atgcttgaattcaagacatccaaagaagaagatttctacaggggtggcaaagtgtcctgg
tggaacttctacttttcttctgaaaattattcttcatcatttgtcaaaagggataaatat
gcgaaacttgaaaaaaagattcaagaatgggcagactcttctcagccggtatgtgcaaaa
attattcacctgtaccaccatccgggctgcggaggaactactttggccatgcatattctc
tgggaactaaggaagaaattcagatgtgctgtgttgaaaaataagacagaggacttttca
gaaattggagaacaggtaacaaatttgatcacttacggagcaacaagccatcaggagtat
ttgcctgtgctgctcctcgttgatgattttgaagaacaagacaatgtctaccttcttcag
acctccatccaaactgctgtcgctaacaaacacattcgatatgagaagcctctagtgatc
attctaaattgtacaaggtcacaaaatcctgagaaaagtgcaaagatgtcagacagcgtt
gccctagtacagcaactctctcccaaagaacagagagcatttgagctgaagctgacagaa
atcaaagaacaacataaaaactttgaagatttttattcttttatgatcatgaaaaccaac
tttaacaaagagtacatagaaaatgtggtcaggaacattctgaaagggcaaaatgttacc
accaaggaggcaaagctctttgctttcctggctctccttaatgcatttgtacctgacact
accatttccctttcacaatgtgagcatttcctaggaatctcaaacaagaaggctttctgg
gggacagaaaagttcgaagacaagatgggtacctactccacaattctaattaaatccgag
gtgatcgaatgcgggagttactgtggtgtgcgcatcattcaccatttgattgccactctc
tcactggaagaactgaagagaagctacaacttgaacaaaagtaaaattgtgatggatatg
ttaacagaaaatctattctacaatactggtataggaaaagacaaattttcccaagacgtg
caaacactgctgctcacaagacagcgcaatgaacatgaaggtgagacaggaaactggttc
tctccattcattgaagctttacataaagacgaaggaaatgatgcagttaaagctgtgtta
tgtgaagctacccgtaggttcaaccccaatgcattcatctgccaagctttagcgagacat
ttctaccttaaagagaaggactttgaaaaggctctacattgggcaaaacaagcaagaaaa
atagagcctaataattcttacatctcagatacactaggtcaagtctataaaagtaaaata
agatggtggatagatgataatatgaaaaatgggattatctcggtgaacgagctaactgaa
cttttagatttagctgaacatgcgtcaaatgctttcaaagactctcaacggcaaaccgaa
gaccgagaatacgaagggaaggaaaggttgtatcagaagtcaaagaggaggtacgatact
tacaacatagctggttatcaaggagagatagaagtcggcctctacaccatccagatgctc
caactcattcctttttttaacaacaaaaatgaactatctaaacgagatatggtcaagttt
atatcaggaaatggtgatatcccaggggacctaagtgagtttaagtctgcactcaagaat
tttattccttatctaactaacctgcagtcttctttgaaaaaatcctttgatttttttgat
gattactttgtccttcttaaacccagaaacaatataaagcaatatgaagaggcgaaaaac
cggagaaaggtggctggatactttaagaagtatgtagaaatatttggccccttggaagaa
ttagaaaatcaaaattttagatcaaagctcagtttacctctacaagtagaaaggactcgg
agaagcctagaagctttaaaagcagacaagttttctggactcttagaatatcttatcaaa
agtccagaagacgctgtgagcgccatggaagatatcgtgaacaaatacactttccttctt
gagcaaagtgttatcaaaacccaacaaaaggaaaagcaaaactttatcttggccagcatc
gttctctcttgtattaaccctacctccaagttaataaagcccattaaaaagctgaaagaa
cagcttcgagagatcctgcaaccaatagcactgacttaccaatttccagaaccttacttt
ctagcctctcttttattctggccagaaaatcaacaactagatcaagattctaaacaaatg
gaaaagtatgctcgagcactagagaatgcttccagggggcaatataaacgcatgtatcgc
acaaagcaaccaattgcatatttctttcttgggaaaggtaacagtaggaacagactcatc
cacaaaggaaaaattgataaaaattttgaaaaggtatcagatattaattcctggtggcat
actggaaaagtatgggaagaggaaaaggtccaggaccttttggttcgtttacagggacga
gttgaaagcaattctttatacatagagtatgggatcaatgaaaaaatcacaataccaatt
acacccactcatttaggtcaacttagaagtgggcaaagcatagaaaaggtgtctttttat
cttggattttccattggaggacttcttgcttatgacattaaaattgtttaa
DBGET
integrated database retrieval system
