Arvicanthis niloticus (African grass rat): 117720697
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Entry
117720697 CDS
T08817
Symbol
Cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu02010
ABC transporters
anu04024
cAMP signaling pathway
anu04152
AMPK signaling pathway
anu04530
Tight junction
anu04971
Gastric acid secretion
anu04972
Pancreatic secretion
anu04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117720697 (Cftr)
09132 Signal transduction
04024 cAMP signaling pathway
117720697 (Cftr)
04152 AMPK signaling pathway
117720697 (Cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117720697 (Cftr)
09150 Organismal Systems
09154 Digestive system
04971 Gastric acid secretion
117720697 (Cftr)
04972 Pancreatic secretion
117720697 (Cftr)
04976 Bile secretion
117720697 (Cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117720697 (Cftr)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
117720697 (Cftr)
Transporters [BR:
anu02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
117720697 (Cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
CFTR_R
ABC_tran
AAA_21
AAA_29
SMC_N
DUF87
T2SSE
RsgA_GTPase
NTPase_1
DO-GTPase2
AAA_30
MMR_HSR1
MeaB
nSTAND3
NB-ARC
Intein_splicing
AAA_23
Motif
Other DBs
NCBI-GeneID:
117720697
NCBI-ProteinID:
XP_034375219
LinkDB
All DBs
Position
15:complement(43539556..43701578)
Genome browser
AA seq
1476 aa
AA seq
DB search
MQKSPLEKASFISKLFFSWTTPILRKGYRHHLELSDIYQAPSADSADHLSEKLEREWDRE
QASKKNPQLIHALRRCVFWRFIFYGILLYLGEVTKAVQPVLLGRIIASYDPENKEERSIA
IYLGIGLCLLFIVRTLLLHPAIFGLHRIGMQMRIAMFSLIYKKTLKLSSRVLDKISIGQL
VSLLSNNLNKFDEGLALAHFIWIAPLQVALLMGLLWDLLQFSAFCGLGLLIVLVIFQAIL
GKMMVKYRDNRAAKINERLVITSEIIDNIYSVKAYCWESAMEKIIENLREAELKMTRKAA
YMRFFTSSAFFFSGFFVVFFSVLPYTVINGIVLRKIFTTISFCIVLRMSVTRQFPTAVQI
WYDSIGMIRKIQDFLQNQEYKVLEYNLMTTGIVMENVTAFWEEGFGELLEKVQLNNDDRK
PSSAENPLSMSHLCLVGNPVLKNINLNIEKGEMLAITGSTGAGKTSLLMLILGELEASEG
IIKHSGRVSFCSQFSWIMPGTVRENIIFGVSYDEYRYKSVVKACQLQEDITKFPEQDNTV
LGEGGVTLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEEQIFESCVCKLMANKTR
ILVTSKMEHLKRADKILILHQGSSYFYGTFSELQSLRPDFSSKLMGYDTFDQFTEERRSS
ILTETLRRFSVDDSSTTWNKNKQSFRQTGELGEKRKNSILNSFSSVRKISIVQKTPLCVE
GESDDLQEKRLSMVPDSEPGEAALPRSNMIATGPTFPGRRRQSVLDLMTFTPSSGSSSLQ
RTRTSIRKISLAPQISLNEVDIYSRRLSQDSTLNITEEINEEDLKECFFDDVIKIPPVTT
WNTYLRYITLHKGLLAVLIWCVLVFLIEVAASLFVLWLLKNNPVNGGNNGTKIANSSYVV
VITSTSFYYIFYIYVGVADTLLALSLFRGLPLVHTLITASKILHRKMLHSILHAPMSTFN
KLKAGGILNRFSKDIAILDDFLPLTIFDFIQLLFIVVGAIIVVSALQPYIFLATVPGLVV
FILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFRRQTYFETLFHKALNLH
TANWFMYLATLRWFQMRIDMIFVLFFIVVTFISILTTGEGEGTAGIILTLAMNIMSTLQW
AVNSSIDTDSLMRSVSRVFKFIDIQTEESMCTQIMKELHSEETSNVLVIKNEHVKKSDIW
PSGGEMVVKDLTVKYVDDGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNIK
GDIQIDGVSWNSVTLQEWRKAFGVITQKVFIFSGTFRQNLDPNGKWRDEEIWKVADEVGL
KSVIEQFPGQLNFTLVDGGYVLSHGHKQLMCLARSVLSKAKIILLDEPSAHLDPITYQVI
RRVLKQAFAGCTVVLCEHRIEAMLDCQRFLVIEEGNVWQYDSLQALLSEKSIFQQAISSS
EKMKLFQGRHSSKQKPRPQITALKEETEEEVQETRL
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcgcctctggagaaagccagctttatctccaaactcttcttcagctggacc
acaccaattttgaggaaaggatacagacaccacttggagttgtcagacatataccaagcc
ccttcagctgattcagctgatcacctgtctgaaaagctagaaagagaatgggacagggaa
caagcttcaaaaaagaatccgcagcttatccatgcccttcggcgatgtgttttctggaga
ttcatcttctatggaatcctgttatacctaggggaagttaccaaggctgtccagcccgtc
ttgttaggaagaatcatagcatcctatgatccagaaaacaaggaggaacgttccattgcc
atttacctaggcataggcttatgccttctcttcattgtcaggacgctgctgctgcaccca
gctatttttggccttcatcgcattggaatgcagatgagaatagctatgtttagtttgatt
tataagaagactttaaagttgtcaagccgtgttcttgataaaataagtattggacaactt
gttagtcttctttccaacaacctgaacaaatttgatgaaggacttgccttggcacatttt
atatggattgcacctttacaagtggctcttctgatggggcttctctgggacttgttacaa
ttctcagccttctgtggccttggtttactgatagtcctggttatttttcaagctatctta
gggaagatgatggtgaagtacagagataacagagctgcaaagatcaatgaaagactcgtg
atcacatcagaaattattgataatatctattctgttaaggcctattgttgggaatcagca
atggaaaaaataattgaaaacttgagagaggcagaactgaaaatgacccggaaggcagcc
tatatgaggttcttcactagctctgccttcttcttttcagggttctttgtagtctttttt
tctgtgcttccctacacagtcatcaatggaatcgttctccgaaaaatattcacaaccatt
tcattctgtattgtcctccgtatgtcagtcacacggcaattccccacggctgttcagata
tggtatgattctattggaatgataagaaaaatacaggatttcctacagaatcaagaatat
aaagtactggagtataacttaatgaccacaggcatagtcatggagaatgtaacagcattt
tgggaggagggatttggggaattactggagaaagtacaactaaacaatgatgacagaaaa
ccatccagtgctgagaaccccctcagtatgagtcatttatgtcttgtgggaaatcctgtg
ttgaaaaacatcaatttgaatatagagaaaggagagatgttggctattactggatctact
ggagcaggaaagacatcactcctgatgttgattttgggagaactggaagcttcagaggga
attattaagcacagtggacgagtttcattctgctcgcaattttcttggattatgccgggt
actgtcagagaaaatatcatctttggtgtttcctatgatgaatacagatataagagcgtt
gtcaaagcttgccaactgcaggaggatatcaccaagtttccagaacaagacaacacagtt
cttggagaaggtggagtcacacttagtggaggtcaacgtgcaaggatttctttagcaaga
gcagtatataaagatgctgatttgtacctattagattccccatttggatatctagatgtt
ttaactgaagaacaaatatttgaaagctgtgtttgtaaattgatggccaacaaaactagg
attttggttacatctaaaatggaacacttaaaaagagctgacaaaatactaattttgcac
cagggcagcagctatttttatgggacattttctgagctacaaagtctacgtccagacttc
agttcaaaactcatggggtatgatacttttgaccagtttactgaggaaagaagaagttca
attctaactgagaccttacgcaggttctcagtagacgattcctctactacctggaacaaa
aacaaacagtcatttagacagactggagagttgggagagaaaaggaagaactctattcta
aattcattcagctccgtaaggaaaatttccattgtgcaaaagactccattatgcgtagaa
ggagaatctgatgatctccaagaaaagagactgtccatggttcccgattctgaaccggga
gaggctgctctgccccgcagcaacatgattgccactggccccacgtttcctggcagaaga
agacagtctgttttggatcttatgacattcacacccagctcaggctccagcagtctccag
aggaccagaacttctattcgaaaaatctccttagcccctcagataagcttaaatgaagtg
gatatatattcaaggcgattatcgcaagatagcacactgaacattacagaagaaattaat
gaagaagatttaaaggagtgtttttttgatgatgtgataaagatacccccggtgacaacg
tggaacacatacctccgatacattactctccataaaggcttacttgcagtactgatttgg
tgcgtgctggtttttctgattgaggtggctgcttctttatttgtgttgtggttgcttaaa
aacaaccctgttaatggcggaaacaacggtactaaaatcgccaacagctcctatgttgtg
gtgatcaccagtaccagcttctactatattttttacatttacgtgggagtggctgacact
ttgcttgccctgagccttttcagaggtttgccgctggtgcatacattaatcacagcatca
aaaattttgcataggaaaatgttacattctattcttcatgcccctatgtcaaccttcaac
aagctgaaagcaggtgggattcttaacagattctccaaagatatagcaattttggatgac
ttcctgcctcttaccatatttgacttcatccagttgctgttcattgtggtcggagctata
atagttgtctcggctttacaaccctacatcttcctagcaacggtgccagggctagttgtc
tttattttactgagggcgtacttccttcatacctcacaacagctcaaacaactggaatct
gaaggcaggagtccaattttcacccaccttgttacaagcttaaaaggactctggacactt
cgagccttccgacgccagacttactttgaaaccctgttccacaaagctctgaatttgcac
actgccaactggtttatgtatctggcaaccttgcgctggttccaaatgagaatagacatg
attttcgtcctcttcttcattgttgttaccttcatctccattttaacaacaggtgaagga
gaaggaacagctgggattattctaactttagctatgaatatcatgagcactttgcaatgg
gctgtgaactcaagcattgatacagatagcttgatgcgatctgtgagcagagtctttaag
tttattgatatacaaacagaagaaagtatgtgtacccagataatgaaagaactacacagt
gaagaaacatctaatgttttagtcattaagaatgaacatgtgaagaaaagcgatatctgg
ccctctggaggtgaaatggttgtcaaagacctcactgtaaaatacgtggatgacggaaat
gccatattagagaacatttctttttcaataagtcctggtcaaagggtggggctcttagga
agaactggctcaggaaaaagtactttgctgtcggcatttttacgattgctgaacattaaa
ggcgacatacagatcgatggtgtctcatggaattcagtgaccttacaagaatggcggaaa
gctttcggagtgataacacagaaagtatttatcttttctggaacattcagacaaaacctg
gatcccaatggaaaatggagagatgaagaaatatggaaagttgcagatgaagttggactc
aagtctgtgatagagcagtttcctgggcagctcaactttacccttgtggatggaggttat
gtgctaagccatggccacaagcagttaatgtgcctggcccgatctgttctcagtaaggcc
aagatcatactgcttgatgagcccagtgcccatctagaccccataacataccaagtaatt
cgacgagttctaaaacaagcctttgctggttgcacagtagtcctctgtgaacacaggata
gaagcaatgttggattgtcagcgatttttggtcattgaagagggcaatgtctggcagtac
gactcccttcaggcacttctgagtgagaagagtatcttccagcaggccattagctcctca
gaaaagatgaagctcttccagggccgccactccagcaagcagaagcctcggccacaaatt
actgctctgaaagaggagacagaagaagaagttcaagaaacccgtctctag
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integrated database retrieval system
