Arvicanthis niloticus (African grass rat): 117720733
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Entry
117720733 CDS
T08817
Symbol
Smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04340
Hedgehog signaling pathway
anu04360
Axon guidance
anu05200
Pathways in cancer
anu05205
Proteoglycans in cancer
anu05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117720733 (Smo)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
117720733 (Smo)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117720733 (Smo)
05205 Proteoglycans in cancer
117720733 (Smo)
09162 Cancer: specific types
05217 Basal cell carcinoma
117720733 (Smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
anu04030
]
117720733 (Smo)
G protein-coupled receptors [BR:
anu04030
]
Frizzled / Smoothened family
117720733 (Smo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
7tm_2
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
117720733
NCBI-ProteinID:
XP_034375270
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Position
15:complement(33322074..33345523)
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AA seq
793 aa
AA seq
DB search
MAAGRPVRGPALAPRRLLQLLLLVLLGGPGRGAALSGNVTGPGPRSAGGSARRNAPVTSP
PPPLLSHCGRAAHCEPLRYNVCLGSALPYGATTTLLAGDSDSQEEAHGKLVLWSGLRNAP
RCWAVIQPLLCAVYMPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDHFPE
GCPNEVQNIKFNSSGQCEAPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAA
FGAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCR
ADGTMRFGEPTSSETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGK
TSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGG
YFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFN
QAEWERSFRDYVLCQANVTIGLPTKKPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWV
WTKATLLIWRRTWCRLTGHSDDEPKRIKKSKMIAKAFSKRRELLQNPGQELSFSMHTVSH
DGPVAGLAFDLNEPSADVSSAWAQHVTKMVARRGAILPQDVSVTPVATPVPPEEQANLWL
VEAEISPELEKRLGRKKKRRKRKKEVCPLGQAPELHHSAPVPATSAVPRLPQLPRQKCLV
AANAWGTGESCRQGAWTLVSNPFCPEPSPHQDPFLPGASTSRVWAQGRLQGLGSIHSRTN
LMEAELLDADSDF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggccgctggccgccccgtgcgtgggcccgcgctggcgccccggaggctgctgcagttg
ctgctgctggtactgctggggggcccgggccggggggcggccttgagcgggaacgtgacc
gggcctgggcctcgcagcgccggcgggagcgcgaggaggaacgcgccggtcaccagccct
ccgccgccgctgctgagccactgcggccgggccgcccactgcgagcctttgcgctacaac
gtgtgcctgggctcggcgctgccctacggagccaccaccacgttgctggctggggactcg
gactcgcaagaggaagcgcacggcaagctcgtgctctggtccggcctccggaatgccccc
cgctgctgggcagtgatccagcccctgctgtgtgctgtctacatgcccaagtgtgagaat
gaccgagtggagttgcccagtcgaaccctctgccaggccacccgaggcccctgtgctatt
gtggagcgggagcgagggtggcctgactttctgcgttgcacgccggaccacttccctgaa
ggctgcccaaatgaggtacaaaacatcaagttcaacagttcaggccaatgtgaagcaccc
ttggtgcggacagacaaccccaagagctggtacgaggacgtggagggctgtgggatccag
tgccagaacccgctgttcacagaggctgagcaccaggacatgcacagttacatcgcagcc
ttcggggccgtcaccggcctctgcacactcttcacactggccacctttgtggctgactgg
cggaactccaatcgctaccccgcggttattctcttctatgtcaatgcgtgtttcttcgtg
ggcagcattggctggctggcccagttcatggatggtgcccgccgggagattgtttgccga
gcagatggcaccatgagatttggggagcccacctccagcgagaccctgtcctgtgtcatc
atctttgtcatcgtgtactatgccttgatggctggagtagtctggttcgtggtcctcacc
tatgcctggcacacctctttcaaagccctgggtactacctaccagcctctctcgggcaag
acatcgtatttccacctgctcacatggtcactcccctttgtcctcactgtggcaatcctc
gctgtggctcaggtagatggagactccgtgagtggcatctgttttgtaggctacaagaac
tatcggtaccgtgctggctttgtcctggccccaattggcctggtgcttattgtgggaggt
tacttcctcatccgaggggtcatgactctgttctccatcaagagcaaccaccctgggctt
ctgagtgagaaggcagccagcaagatcaacgagaccatgctgcgcctgggcatttttggc
ttcctggcctttggctttgtgctcatcaccttcagctgccacttctatgacttcttcaac
caggctgagtgggagcgtagcttccgggactatgtgctatgccaagccaatgtgaccatt
gggctgcccaccaagaagcccattcctgactgtgagatcaagaatcggcccagcctcctg
gtggagaagatcaatctatttgccatgtttggcactggcattgccatgagcacctgggtc
tggaccaaggccaccctgctcatctggaggcgcacctggtgcaggttgactgggcacagt
gatgatgaacccaagagaatcaagaagagcaagatgattgccaaggccttctctaagcgc
cgtgaactgctacagaacccaggccaggagctctccttcagcatgcacactgtctcccat
gatggacccgttgcgggtttggcttttgacctcaatgaaccctcagctgatgtctcctct
gcctgggcccagcatgtcaccaaaatggtggctcggagaggagccatattgccccaggat
gtgtctgtcacccctgtggcaactccagtgcccccggaagaacaagccaacctgtggctg
gttgaggcagagatctccccagagttagagaagcgcttgggccggaagaagaagcggagg
aagaggaagaaggaggtgtgccccttggggcaagcccctgagcttcaccactctgctcct
gttcccgccaccagtgcagttcctcggctgcctcagctgcctcggcagaagtgcctggta
gctgcaaatgcctggggaacaggggagtcctgccgtcagggagcctggactctagtctcc
aaccccttctgcccagagcctagtccccatcaagatccatttctccctggtgcttcaacc
tccagggtctgggctcagggccgcctccaggggctggggtccattcattcccgcactaac
ctaatggaggctgagctcttggatgcagactcggacttctga
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