KEGG   Arvicanthis niloticus (African grass rat): 117720757
Entry
117720757         CDS       T08817                                 
Symbol
Shh
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04340  Hedgehog signaling pathway
anu04360  Axon guidance
anu05200  Pathways in cancer
anu05205  Proteoglycans in cancer
anu05217  Basal cell carcinoma
anu05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:anu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    117720757 (Shh)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    117720757 (Shh)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    117720757 (Shh)
   05205 Proteoglycans in cancer
    117720757 (Shh)
  09162 Cancer: specific types
   05226 Gastric cancer
    117720757 (Shh)
   05217 Basal cell carcinoma
    117720757 (Shh)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:anu01002]
    117720757 (Shh)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:anu00536]
    117720757 (Shh)
Peptidases and inhibitors [BR:anu01002]
 Cysteine peptidases
  Family C46: hedgehog family
   117720757 (Shh)
Glycosaminoglycan binding proteins [BR:anu00536]
 Heparan sulfate / Heparin
  Morphogens
   117720757 (Shh)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 Vint Ribosomal_S6e
Other DBs
NCBI-GeneID: 117720757
NCBI-ProteinID: XP_034375305
LinkDB
Position
15:complement(4436614..4446841)
AA seq 438 aa
MLLLLLARCFLVVLASSLLVCPGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGA
SGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWP
GVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESK
AHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDQGRLLYSDF
LTFLDRDDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSGPTPGPSALFASRVRPGQ
RVYVVAERGGDRRLLPAAVHSVTLREEAAGAYAPLTAHGTILINRVLASCYAVIEEHSWA
HRAFAPFRLAHALLAALAPARTDGGGGDSIPAPQSAAEARGAGPAAGIHWYSQLLYHIGT
WLLDSETLHPLGMAVKSS
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgctgctgctgctgctggccagatgttttctggtggtccttgcttcctcgctgctggtg
tgccccgggctggcctgcgggcccggcagggggtttggaaagaggcggcaccccaaaaag
ctgacccctttagcctacaagcagtttatccccaacgtagccgagaagaccctaggggcc
agcggaagatatgaagggaagatcacaagaaactccgaacgatttaaggaactcaccccc
aattacaaccccgacatcatatttaaggatgaggaaaacacgggagcagaccggctgatg
actcagaggtgcaaggacaagctaaatgccttggccatctctgtgatgaaccagtggccc
ggagtgaagctgcgagtgaccgagggctgggatgaagacggccatcattcagaggagtct
ctccactatgagggccgagccgtggacatcaccacatccgaccgggaccgcagcaagtac
ggcatgctggctcgcctggctgtggaggccggcttcgactgggtctactacgagtccaaa
gcccacattcattgctccgtgaaagcagagaactccgtggcggccaaatccggcggctgc
ttcccaggatcggccacagtgcacctggagcagggcggcaccaagctggtgaaggaccta
cgtcccggggaccgcgtgctggcggctgatgaccagggccggctgctgtacagcgacttc
ctcaccttcctggaccgcgacgatggcgccaagaaggtcttctacgtgatcgagacgcgg
gagccacgcgagcgcctgctgctcaccgccgcgcacctgctcttcgtggcgccgcacaac
gactcggggcctacgcccgggccgagcgcgctcttcgccagccgcgtgcgcccggggcag
cgcgtgtacgtggtggctgaacgcggcggggaccgccggctgctgcccgccgcggtgcac
agcgtgacgctgcgagaggaggcggcgggcgcgtacgcgccgctcacggcccacggcacc
attctcatcaaccgggtgctcgcctcgtgctacgccgtcatcgaggagcacagctgggca
caccgggctttcgcgcccttccgcctggcgcacgcgctgctggccgcgctggcacccgcc
cgcacggacggcgggggcggggacagcatccctgcaccgcaatctgcagcggaagcgagg
ggcgccgggccggctgcgggcatccactggtactcgcagctgctctaccacattggcacc
tggctgttggacagcgagaccctgcatcccttgggaatggcggtcaagtccagctga

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