Arvicanthis niloticus (African grass rat): 117720761
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Entry
117720761 CDS
T08817
Symbol
Podxl
Name
(RefSeq) podocalyxin
KO
K06817
podocalyxin-like
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117720761 (Podxl)
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Gene cluster
GFIT
Motif
Pfam:
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
117720761
NCBI-ProteinID:
XP_034375311
EnsemblRapid:
ENSANLG00005016475
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Position
15:31546257..31591644
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AA seq
519 aa
AA seq
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MRSTLALSALLLQLVLLLSPPSLSQSAGSGASTSIINSTIVRSHQNLSTAVTKTASENVT
AGHLVATTLFQVQQSSSTLSKTSVQSPTTVPTTTNSRDNQSGGSVTTTSSGSEDDKTKTS
SPSNNASTSSSGQTVSSGGKSTDNITKAPPTTWLTNNISSQPTDLTTSPKFPSTPTTDSI
TSPYQLVASSSQSTESHPEGQQTPTAVPGSSVSVSSTDNSTLTEKPTTIHKPLGTSETIQ
PTPSQMAGNTTFSVSTPLQPTRFPVGTNVVPRTEEFTHPSSNSTTMAPQGPSIPSPTWTS
GNYKLKCDPPIMPDEELLILNLTRARLCEGSPPDERLVELLCHSVKDSFKQAQDSCTLQL
APILENQAVAVKRITIETKLSPKAVFELLKDKWDDLTEAGVSDMKLGKEGPPEVNEDRFS
LPLIITIVCMASFLLLVAALYGCCHQRISQRKDQQRLTEELQTVENGYHDNPTLEVMETP
SEMQEKKVVNLNGELGDSWIVPLDNLTKDDLDEEEDTHL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccactctggcgctctccgcgctgctactgcagctggtgctgctactgtctcct
ccatctctctcccagtctgccggaagtggggctagcacatctattatcaattctaccatt
gtccggagccatcaaaacctctcgacagcagtgactaaaacagcatccgaaaatgtcaca
gctggtcacctagtggcaactacactttttcaagttcagcaaagcagctctacattatcc
aaaacctcagtccaatctccgacaactgtgccaaccaccacaaactccagggacaatcaa
agcggtggcagtgtgactacaacttccagtggctccgaggatgacaagactaaaacaagc
tcccctagtaacaatgcctccactagtagcagtggacagacagtctcctctggaggcaaa
agcactgacaatattaccaaagccccaccgaccacttggctaaccaacaacatctcttct
cagcctactgacctgactacctccccaaagtttccttctactcccacaacagacagcata
acaagcccttaccagcttgtggcttcttcttcacagagcacagagagccatcctgaggga
cagcagacccctactgctgttcctggcagctctgtctctgtgtccagcactgacaactct
acgctgacagagaagcctactactatacacaagccgctgggcacctctgaaaccattcag
ccaacccccagccagatggcaggcaacacaacattctccgtctccacaccgctacagcct
acaaggtttccagtgggaactaatgtcgtgcctagaactgaggaattcacacatcccagc
tctaattctaccaccatggcccctcaaggccccagcataccctctcccacctggacttct
gggaattacaagctcaaatgtgatcctcccataatgccagacgaggaactcctcattctg
aatctcacgagagcccgcctttgcgaagggagccctccggatgaaagactcgtggaactg
ctatgtcactcagtcaaagactccttcaagcaagctcaggattcgtgtactctacagctg
gcccctattctagagaaccaggcggtggcagtgaaaagaattactattgagacaaagctt
tctcctaaggccgtgttcgagctcctgaaggacaaatgggatgacctgacagaggccgga
gtcagtgacatgaagctggggaaggaaggccctccagaagtcaatgaggaccgcttcagc
ctgcccctcatcatcaccattgtctgcatggcatccttcctgctcctcgtcgctgccctc
tacggctgctgtcaccagcggatctcccagaggaaggaccagcaacgactcacagaggag
ctacagacagtagagaatggttaccatgacaacccaaccttggaagtgatggagactcct
tctgagatgcaggagaagaaggtggtcaaccttaatggggagctgggggacagttggatc
gtccctctggacaacttgaccaaggatgacctagatgaggaggaagacacacacctctga
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