Arvicanthis niloticus (African grass rat): 117720881
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Entry
117720881 CDS
T08817
Symbol
Pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117720881 (Pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117720881 (Pex1)
Membrane trafficking [BR:
anu04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
117720881 (Pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
AAA_22
nSTAND3
RuvB_N
ABC_tran
TIP49
Sigma54_activat
AAA_33
AAA_5
AAA_28
Sigma54_activ_2
NPHP3_N
AAA_18
RNA_helicase
AAA_29
IstB_IS21
DUF815
Bac_DnaA
Mg_chelatase
AAA_7
AAA_2
ATP-synt_ab
AAA_19
T2SSE
ORC-CDC6-like
DUF87
APS_kinase
ABC_ATPase
CDC48_N
AAA_10
Motif
Other DBs
NCBI-GeneID:
117720881
NCBI-ProteinID:
XP_034375476
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All DBs
Position
15:57458389..57500105
Genome browser
AA seq
1282 aa
AA seq
DB search
MWSSDRLAGAGSGGTVVTIAFTNSRDCFLHLPRRLVAQLHLLQNQAIEVTGDRQPTYLSW
VEGRHFNDQSENVAEVNRQVGQKLGLSSGDQVFLRPCSHVVSCQQVEVEPLSADDWEILE
LHAVSLEQHLLDQIRIVFPQAVVPIWVDQQTYIFIQIVALMPAAPYGRLETNTKLLIQPK
TRQTKESTFPKERDTHGQVHSYGREQKGISKELQTKQLHMNTEGVPGSNGRDPEVPGDPL
KPRWWAVLGSMFSFGPDNKESAWGSLELGAFKNMQSQAVPLDSIYRVCRVQPPSVHNTPA
TSVFHKHCTVHVFPWDQEYFDVEPSFTVIYGKLVKLHSPKQQQDKSKQGALLPEKEKQPS
ESPDPKQIGSTHSEEAEACVLKVVWNGLEELKNASEFTKSLEPLHRGKVWIPDDLRKRLN
IEMHAVVRITPLETTPKIPRCLKLQPRENLPKDVSEEDVKSVFSSWLQQSTTTMLPLVIS
KEECIKLEIKDGLKEFSLSIVHSQKKEKDQEKTVFVLSPILLQRISVQVLLEPMIREEHS
AEIDFLLPSLTLSCLGGVSSLGISAMEHITHSLLGRPLSRQLMSLVAGLRNGALLITGGK
GSGKSTLAKAICKEAHAALDAHVEIVDCKALRGKRLESIQKALKVAFSEAAWRQPSVLLL
DDLDLIAGLPSVPEHEHSPEAVQSQRLAHALNDMIKELVSMGSLVGLIATSQLQRSLHPS
LVSAQGIHTFQCIQHIQPPSQEQRCEILHSVVKNKLGCDISESPDVDLQCIAKDTEAFVA
RDFTVLVDRAIHSSLSRQHGSTREELTLTTSDFQKALHGFLPASLRNVNLHKPRDLGWDK
IGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMN
FISIKGPELLSKYIGASEQAVRDVFTRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVV
NQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLS
KSLALADDVDLQHVASVTESFTGADLKALLYNAQLEALQGRLLPSGLHDGGSSSDSDLSL
SSMVFLNHSSGSDDSAGDGECGLEQSLVSLEMSEILPDESKFNMYRLYFGSSYESELGNG
TSSDLSSHCLSAPSSMTQDLPAAPGKDPLFTPHAVFRTPSQEGCQDLTQEQRDQLRADIS
IIKGRYRSQSGEDESLNQPGPIKTNFAISQAHLMTALAHTRPSISEDEGKEFAELYENFQ
NPKKRKSQSGTVFRTGQRVTLA
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcagtgatcgcttggcgggtgcggggtctggtgggacggtcgtgacgatagct
ttcacgaactctcgggactgcttcctgcatctgccgcggcgcctcgtggcccagcttcac
ctgctgcagaatcaagctatagaagtaactggggaccgccagcctacctacttgagctgg
gtagaaggcaggcattttaatgatcaaagtgaaaatgtggcagaagttaatagacaagtt
ggacagaaacttggactctcgagcggggatcaggtgtttctcaggccttgttcccatgtg
gtatcttgccaacaggttgaggtggagcccctctcggcagacgactgggagatactggag
ctgcatgccgtttccctcgagcagcatcttctagatcagattcgaatcgttttccctcaa
gccgttgttcccatctgggttgaccagcagacgtacatttttatccagattgttgctctg
atgccagctgccccttacggaaggctagagaccaacaccaaactccttattcagccaaag
acacgccaaaccaaagaaagcacatttccaaaagaaagagacacacatggacaagttcat
agttatggccgagaacagaaagggatatcaaaagaactgcaaaccaagcagcttcatatg
aacacagaaggtgttcccgggtctaatggacgagacccagaagtcccaggtgacccgttg
aagccacgctggtgggctgtgctaggaagcatgttttcctttgggcctgacaacaaagag
tcagcctggggctcgttggaacttggtgctttcaaaaacatgcagtcacaggctgtccct
ctagacagtatttacagagtatgccgagttcagcctccgagtgtgcacaacacccccgct
acctccgtgtttcacaaacactgtaccgtccatgtatttccgtgggaccaagaatatttt
gatgtggagcccagcttcactgtgatctatggaaaactagttaagctacattctccaaaa
caacagcaagacaaaagtaagcagggtgccctgttacctgaaaaagaaaagcaaccatcc
gagtctccagatcctaagcagatcggctccacccacagtgaggaagccgaggcctgcgtg
ctgaaggtagtctggaacggactcgaggagctgaagaatgcctcggagttcaccaaaagt
ctagagcctctccaccgaggcaaagtctggattccagatgacctgagaaagagactaaat
atagaaatgcatgcagtagtcagaataactccactggaaaccacccctaaaatcccaaga
tgtctgaaattacagcctagagagaacttacctaaagacgtgagtgaagaagatgtaaaa
tctgtgttctcgtcttggctacagcagtccactaccaccatgcttcctttggtaatatca
aaggaagagtgtattaaactggaaattaaagatgggttgaaagagttctctctgagtata
gttcattctcagaaaaaagaaaaggatcaagaaaaaactgtttttgtgttgagtcccatt
ctgctgcagaggatctcagtacaagtccttctagagcccatgataagagaagaacacagt
gcggaaattgactttcttcttccctctttaacgctgagctgtttgggtggagtgagttcc
ttaggtatatccgccatggaacacatcactcacagtctcctgggacgccctttgtctcgg
cagctgatgtctctcgtcgcaggacttaggaatggggctcttttgatcactggaggaaag
ggaagcgggaaatcaacgttagctaaagccatctgtaaggaagcacatgccgctctggat
gcccatgtggagatagtcgactgcaaagctttacgaggaaaaaggcttgaaagcatacaa
aaagccctcaaggtggctttctcagaggcggcctggaggcagccatctgtccttctgctg
gatgacctggacctcattgctggactgccaagtgtcccagagcatgaacacagccctgag
gcggtgcagagccagcggctggcacatgctttgaacgatatgatcaaagagcttgtgtct
atgggaagcttggttgggctcatcgccacgagccagctgcagcgctctctacacccttca
cttgtatctgctcaaggaatccacacattccagtgcatccagcacattcagcctcccagc
caggaacagagatgtgaaattctgcatagtgtagtgaaaaataaactgggctgtgatata
agcgagtctccggacgtggacctgcagtgcatagctaaagacacggaagcttttgtggct
cgagactttacagttctcgtggaccgagccatacactcttctctgtctcgccagcatggc
tccacccgggaagaattgactttaacaacatcagacttccaaaaggctctccatggattt
cttcctgcttctctgcgaaatgtcaacctgcataaaccgagagacctgggctgggacaag
attggtggattgcatgaagttcggcagatactcatggatactatccagttaccagccaag
tacccagaattatttgcaaacttacccatacgacagaggacgggaatactgctttatggt
cctcctgggacaggaaaaactttacttgctggggtagttgcaagagagagtggaatgaat
tttattagtattaagggaccagagttactgagcaagtacatcggagccagtgagcaggcc
gtgcgggacgtcttcaccagagcacaggctgcaaagccctgcattcttttctttgatgag
tttgaatccatcgctcctcgaagaggtcacgacaacacaggggttacagaccgagtagtc
aaccagttgctgacacagttagacggagtagaaggcttacagggagtttatgtgttggct
gctactagtcgccctgacttaatcgaccctgccctgttgcggcctggccgactggataaa
tgtgtatactgccctcctccagatcaggtgtctcgtcttgagattttaactgtcctcagc
aagtctctagctctggcagacgatgtggaccttcagcacgtggcgtctgtcaccgagtcc
ttcactggagcggatctaaaagctctgctgtacaacgcacagctggaggccctgcaggga
cggctgctgcccagtgggctccacgatggaggctccagctctgatagtgacctaagtctg
tcttcaatggtctttcttaaccacagcagtggttccgacgactcagctggagatggagag
tgtggcttagagcaatcccttgtttctctcgagatgtctgagatccttccagacgaatca
aaattcaatatgtaccggctctactttggaagctcatatgaatcagaacttggaaatgga
acctcttctgacttgagctcacactgtctgtcagcaccaagctccatgactcaggattta
cctgcagctcctgggaaagacccattgtttacaccacatgctgtgttcaggacaccttcc
caagaaggctgccaagaccttacacaggaacagagagaccagctgagggcggacatcagc
atcatcaaaggcagataccggagccaaagtggagaggatgaatcccttaaccagcctgga
ccaatcaaaaccaattttgccattagccaggcacatttaatgactgcactggcccacaca
agaccatccattagtgaagatgaagggaaggaatttgctgagctgtatgaaaactttcaa
aatccaaagaagagaaaaagtcaaagtggaaccgtgtttcgaactggacagagagtgact
ttagcataa
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integrated database retrieval system
