Arvicanthis niloticus (African grass rat): 117721218
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Entry
117721218 CDS
T08817
Symbol
Kcnn1
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1 isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04911
Insulin secretion
anu04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
117721218 (Kcnn1)
04929 GnRH secretion
117721218 (Kcnn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117721218 (Kcnn1)
Ion channels [BR:
anu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117721218 (Kcnn1)
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Ion_trans
DALR_1
DUF4140
Apionate_lact_M
Motif
Other DBs
NCBI-GeneID:
117721218
NCBI-ProteinID:
XP_034375687
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Position
16:58633858..58646013
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AA seq
536 aa
AA seq
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MSSRSHNGSVGRPLGSGPGFLRWEPVDPEAGRPTQPTQGPGLQMVVKGQPTGLSPGGPRG
YPQEQEEEEEEEEEDRTGSGKPPTVSHRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTE
TELSWGVYTKESLWSFALKCLISLSTVILLGLVILYHAREIQLFLVDNGADDWRIAMTWE
RVSLISLELAVCAIHPVPGHYRFTWTARLAFSLVPSAAEADLDVLLSIPMFLRLYLLARV
MLLHSRIFTDASSRSIGALNRVTFNTRFVTKTLMTICPGTVLLVFSISSWIVAAWTVRVC
ERYHDKQEVTSNFLGAMWLVSITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAV
VARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKHTRLVKKPDQGRVRKHQ
RKFLQAIHQAQKLRSVKIEQGKVNDQANTLAELAKAQSIAYEVVSELQAQQEELEARLAA
LESRLDVLGASLQALPGLIAQAICPLPPPWPGPGHLATAMQSPRSHWLPTIGSDCG
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgcagccacaatggcagcgtggggcggcctctgggcagtgggcctggattc
cttcgctgggagcctgtggaccctgaggcaggccgccccacacagcccacccaaggccca
ggcctgcagatggtggtcaagggtcagcctaccgggctgtcacccggtggtcccaggggc
tacccccaggagcaggaggaagaagaggaagaggaagaggaggacaggacaggctctggg
aagcccccaacggtcagccaccgcctgggccaccgtagggccctctttgagaaacgtaaa
agactcagtgactacgcgctcatctttggcatgtttgggattgtcgtcatggtgacagaa
acagagctgtcctggggtgtgtacaccaaggagtctctgtggtcgtttgccctgaaatgt
ctcatcagcctgtccactgtcatcttgcttggccttgtcatcctttaccacgcccgcgag
atccagctgttcttggtggacaatggtgccgatgactggcgtatcgccatgacgtgggag
cgcgtgtccttgatctcgctggagctggctgtgtgtgccatacacccggtgcccggccac
taccgcttcacgtggacggcgcggctggccttctcgctggtgccgtcggcagccgaggcg
gatctggatgtgcttctctccatccccatgttcctgcgcctctacctgctggcccgggtc
atgcttctgcatagccgcatcttcaccgacgcgtccagccgcagcatcggggcccttaac
cgcgttaccttcaacacgcgattcgtcaccaagacgctcatgactatctgccctggcact
gtgctgttggtcttcagcatctcctcctggattgttgctgcgtggacagtgcgtgtgtgc
gagaggtaccatgacaagcaggaggtgaccagcaacttcctgggagccatgtggcttgtc
tccattaccttcctgtccatcggctacggagacatggtgccgcacacctactgtgggaag
ggggtgtgtctgctcactggcatcatgggagcaggctgcactgcactggtggtggccgtc
gtggcccggaagttggaactcaccaaggctgagaaacatgtgcacaacttcatgatggat
acacagctcaccaagcgggtaaaaaacgctgctgcaaacgttctcagggagacatggctc
atctacaaacacaccaggctagtgaagaagccagaccaaggccgggttcggaaacaccag
cgtaagttccttcaggccatccatcaggctcagaagctccggagtgtgaagattgaacaa
gggaaggtgaatgatcaggccaacacgctggctgaactggccaaggcacagagcatcgca
tacgaggtggtgtcagagctgcaggcccagcaggaagagttggaggcgcgcctggccgcc
ctggagagccgcctggatgtcctgggcgcctccctgcaggccctaccaggcctcatagcc
caagccatatgccctctaccaccgccctggcctgggcctggtcacctggccacagccatg
cagagcccacgaagccactggctgcccaccataggatcagactgtgggtga
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