Arvicanthis niloticus (African grass rat): 117721269
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Entry
117721269 CDS
T08817
Symbol
Ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49 isoform X1
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
anu03009
]
117721269 (Ddx49)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117721269 (Ddx49)
Ribosome biogenesis [BR:
anu03009
]
Eukaryotic type
90S particles
Helicases
117721269 (Ddx49)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-GeneID:
117721269
NCBI-ProteinID:
XP_034375746
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All DBs
Position
16:59165833..59174852
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AA seq
480 aa
AA seq
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MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK
PHVVIATPGRLADHLRSSNTFNMKKIRFLVMDEADRLLEQGCTDFTTDLETILAAVPARR
QTLLFSATLTDTLKELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVHLVQ
TFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYR
ILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLL
HAIEEQIKQQLAELAVEEAEVLQILTQVNVVRRECEIKLEASHFDEKKEINKRKQMILEG
KDPDMEAKRKAELAKIKQRNRRFKEKVGQTLRQQKAGRTGRRSRPSGPRLQEPAQAEGQG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcggggttcgctgagcttgggctctcgtcctggctggtggaacagtgtcgacagctg
gggttgaagcaacccacgccggtgcagctcgggtgcatcccggccatcctggaaggtcgg
gactgcttgggctgtgcaaaaacaggaagtggcaagacagcggcttttgtacttcccatc
ttgcagaagctgtctgaggacccttatggcatcttctgcctggttctgacacccaccaga
gagttggcctaccagatcgctgagcagttccgggtgctagggaagcctctgggcctgaag
gactgcatcatcgttggcggcatggacatggtggcgcaagcactggagctctctcggaag
ccacacgtggttattgccacccctgggcgcctggctgaccacctgcgcagttccaacact
ttcaacatgaagaaaatccgattcctggtgatggatgaggccgacaggctgctggagcag
ggttgcaccgacttcaccacagacctggagaccatcctggcagccgttcctgcacgcagg
caaacgctactgttcagtgccacactgactgacacactcaaggagctacagggcctggct
accaaccagcccttcttttgggaggcgcaggccccggttcgcacggtggaacagcttgac
cagcgctacctcctggtgcccgagaaggtgaaggacgcctacctggttcacctggtccag
accttccaggaccagctggaagactgctccatcatcatcttcaccaacacctgcaagacc
tgccagattctttgtatgatgcttcggaagttcaacttccccacggtggcgctgcactcc
atgatgaagcagaaagagcgctttgcggccctggccaaatttaagtccagcatctatcgg
attcttatcgccactgacgtggcctcgaggggcctggacatccccactgtgcaggtggtc
atcaaccacaacacccctggactccccaagatctacattcatcgggttggtcgcacagcc
cgtgcagggaggcagggacaggccatcacactggtgacgcagtatgacatccacctgttg
catgccatcgaggagcagatcaagcagcagctggcggagctggcagtggaagaggctgag
gtcctgcaaatcctcacgcaggtcaacgtggtgcgcagggagtgcgaaattaaactggag
gcttcacattttgatgaaaagaaggagatcaacaagcggaaacagatgatcctggagggg
aaggacccagacatggaggccaagcgcaaagcagagctggccaaaatcaagcaacggaac
cggcgcttcaaggagaaagtggggcagacacttcggcagcagaaagcagggcgcactggc
cgacggtcacgtccttctggacctcggctccaagagccagcccaggccgagggtcagggc
tga
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