Arvicanthis niloticus (African grass rat): 117721500
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Entry
117721500 CDS
T08817
Symbol
Colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00310
Lysine degradation
anu00514
Other types of O-glycan biosynthesis
anu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117721500 (Colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117721500 (Colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
anu01003
]
117721500 (Colgalt1)
Enzymes [BR:
anu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117721500 (Colgalt1)
Glycosyltransferases [BR:
anu01003
]
O-Glycan biosynthesis
O-linked Gal type
117721500 (Colgalt1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
117721500
NCBI-ProteinID:
XP_034376099
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All DBs
Position
16:60282036..60295683
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AA seq
612 aa
AA seq
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MAALLRGLGGLPLLLLLLGDPRGADGYFPEERWSPESPLQAPRVLIALLARNAAPALPAT
LGALERLRHPRERTALWVATDHNTDNTSAILREWLVAVKGLYHSVEWRPAEEPSSYPDEE
GPKHWSDSRYEHVMKLRQAALKSARDMWADYILFVDSDNLITNPDTLSLLIAENKTVVAP
MLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRERRGCFAVPMVHSTFLIDLRKSASRSL
AFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEVYGFLPVPLRAHSSLQDEAESFMH
VQLEVMVKHPPVQLSRFISAPRKTADKMGFDEVFMINLKRRRDRRERMLRALHEQEIDCR
LVEAVDGKAMNTSQVEAMGIQMLPGYRDPYHGRPLTKGELGCFLSHYNIWKEVVDQGLQK
SLVFEDDLRFEIFFKRRLMNLMRDVEREGLDWDLIYVGRKRMQVEHPEKAVPRVRNLVEA
DYSYWTLAYVISLQGARKLLAAKPLAKMLPVDEFLPVMFDKHPMSEYKSHFSPRNLRAFS
VEPLLIYPTHYTGDDGYVSDTETSVVWNNEQVKTDWDRAKSQKMREQQALSREAKNSDVL
QSPLDSTARDEL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttgctccgtgggttaggcgggctgccgctgctcctcctgctgctgggcgac
ccgcggggcgcggacggctactttccagaagagcgctggagccccgagtccccgctacag
gcgccgcgtgtgctcatcgcgctgctggcgcggaacgcggcacccgcgctgcccgccacg
ctgggcgccctggagcggctgcgccacccacgggagcgcacggcgctgtgggtggccaca
gatcacaacactgacaacacttcagccatacttcgagagtggctggtggcagtgaagggt
ttataccactctgtagagtggcgaccggcagaggaacccagttcctacccagatgaagag
ggccccaaacactggtctgattcccgctacgagcatgtcatgaaattacgccaagcagcc
ttgaagtcagctagggacatgtgggctgattacattctgtttgtggacagcgacaacttg
atcaccaaccctgacactctgagcctgctcatcgctgagaacaagacggtggtggccccc
atgctggactcccgagcagcgtattcaaacttctggtgtgggatgacttcgcagggctac
tacaagcgcacccctgcctacatccccatccggaaacgagagcgcaggggctgctttgca
gttcccatggtgcactccaccttcctcattgacctgcgtaagtctgcctccaggagcctg
gccttctacccaccacaccccgactacacctggtcttttgatgacatcattgtcttcgcc
ttctcctgtaaacaggcagaggtgcaaatgtatgtgtgcaataaggaggtgtacggcttc
ctgcccgtgccgctgcgcgcgcacagcagcctgcaggacgaggcagagagcttcatgcac
gtgcagctggaggtcatggtgaagcatccgccagtgcagctctcccgattcatctcagca
cccaggaagactgcagacaagatgggcttcgacgaggtcttcatgattaacctgaagcgg
aggcgggaccggcgagaacgcatgctgcgggcactgcatgaacaggagattgactgccgg
ctggtggaggctgtggatggcaaagccatgaacaccagccaggtggaggccatgggcatc
cagatgctgcctggctaccgggacccctaccatgggcggccactcaccaagggagagctg
ggctgctttctcagccactacaacatctggaaggaggtggttgaccagggactacagaag
tcactagtgtttgaggatgatctgcgttttgagatcttcttcaagagacgtctgatgaac
ctcatgcgggatgtggagcgtgaggggctggactgggacctcatctatgtgggccggaag
cgcatgcaggtggagcaccctgaaaaggctgtaccccgtgtaaggaacctggtggaggct
gattactcctactggacactagcctatgtaatctccctgcaaggtgctaggaagttgctt
gctgccaagccactggccaaaatgttacctgttgacgagtttctgcctgtcatgtttgac
aagcacccaatgtcagaatataagagtcacttctctccccgcaacctgcgtgccttctcc
gtggagccccttcttatctaccctacacactacacaggggatgatggctatgtgagtgac
acagagacctcagttgtgtggaataatgagcaggttaagactgactgggaccgagccaag
tcccagaagatgcgggaacagcaagcactgagccgtgaggccaagaactcagatgtgctc
cagtctccactggacagcactgcccgtgatgagctttga
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