Arvicanthis niloticus (African grass rat): 117721514
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Entry
117721514 CDS
T08817
Symbol
Opn3
Name
(RefSeq) opsin-3 isoform X1
KO
K04256
c-opsin
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
anu01009
]
117721514 (Opn3)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
anu04030
]
117721514 (Opn3)
Protein phosphatases and associated proteins [BR:
anu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117721514 (Opn3)
G protein-coupled receptors [BR:
anu04030
]
Rhodopsin family
Vision
Opsin
117721514 (Opn3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
117721514
NCBI-ProteinID:
XP_034376120
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Position
16:complement(65536395..65566806)
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AA seq
400 aa
AA seq
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MYSGNRSGGQGYWEDGAGAEGAAPAGTRSPAPLFSPSAYERLALLLGCLALLGVGGNLLV
LLLYSKFPRLRTPTHLFLVNLSLGDLLVSLFGVTFTFASCLRNGWVWDAVGCAWDGFSGS
LFGFVSITTLTVLAYERYIRVVHARVINFSWAWRAITYIWLYSLAWAGAPLLGWNRYILD
VHGLGCTVDWKSKDANDSSYVLFLFLGCLVVPMGIIAHCYGHILYSVRMLRCVEDLQTIQ
VIKMLRYEKKVAKMCFLMASVFLTSWMPYIVTRFLVVNGYGHLVTPTVSIVSHLFAKSST
VYNPVIYIFMIRKFRRSLLQLLCFRLLRCQRPAKNLPAAESEMQIRPIVMSQKDGDRPKK
KVTFNSSSIIFIITSDESLSVEDSDRSSASKVDVIQVRPL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggggaaccgtagcggcggccagggctactgggaggacggggcgggcgcggag
ggcgcagcaccggcgggcacgcggagcccggctcctctcttcagcccctcggcgtacgag
cgcctggcgctgctgctgggttgcctcgcgctgctgggcgtcggcggcaacctgctggtg
ctgcttctctactccaagttcccgcgactgcgcactcccacccacctcttcctggtcaac
ctcagcctgggcgacctgctggtatccctgttcggagtcaccttcaccttcgcgtcgtgc
ctgcggaacggctgggtgtgggacgccgtgggctgcgcgtgggacgggtttagcggcagc
ctctttgggtttgtttccattaccaccctcactgtgctggcctatgaacgttatatccgt
gtggtacatgccagagtgatcaatttttcctgggcctggagggccattacctatatctgg
ctctattccttggcatgggcaggagcacctctcctgggctggaataggtacatcctagat
gtacatggactgggctgtactgtggactggaaatccaaggatgccaacgactcctcctat
gtgctcttcttgtttcttggctgcctggtggtacccatggggatcatagcccattgctac
ggtcacattctgtattctgttcgaatgcttcgctgtgttgaagatcttcagacaattcaa
gtgatcaagatgttaagatatgaaaagaaagtagccaagatgtgctttttgatggcctct
gtctttctcacctcctggatgccttatattgtgacccgcttcttggtggtcaatggctat
ggacacttggtcaccccaaccgtgtctattgtttctcatctctttgctaaatcgagcact
gtgtacaacccagttatctacatcttcatgatcagaaagtttcggaggtctcttctgcag
ctcctatgcttccgtctgctgagatgccagcggcctgctaaaaacctaccagcagctgag
agtgaaatgcagatcaggcccatcgtgatgtcacagaaagatggggacaggccaaagaag
aaagtgacctttaactcctcctccatcatctttatcatcaccagtgatgagtccttgtca
gttgaggacagtgacagaagcagcgcatctaaggttgatgtaatccaagtgcgtccttta
taa
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