Arvicanthis niloticus (African grass rat): 117721524
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Entry
117721524 CDS
T08817
Symbol
Spta1
Name
(RefSeq) spectrin alpha chain, erythrocytic 1
KO
K27408
spectrin alpha, erythrocytic
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117721524 (Spta1)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117721524 (Spta1)
Intermediate filaments
Intermediate filament-binding proteins
117721524 (Spta1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_7
SH3_2
EF-hand_6
SH3_10
SH3_3
Motif
Other DBs
NCBI-GeneID:
117721524
NCBI-ProteinID:
XP_034376138
LinkDB
All DBs
Position
16:64186236..64268631
Genome browser
AA seq
2415 aa
AA seq
DB search
METPKEAAVESSGPKVLETAEEIQQRRQEVLDQYQRFKKRVAERGQKLEESYHYQVFRRD
ADDLEKWIMEKLEITRDKTYEPTNIQGKYQKHESFVSEVQAKSRVLPELEEIREARFAED
HFAHEDTKTHLKELRHLWDLLLELTQEKSDVLLRALKFYQYSQDCEDILEWVKEKEAIVT
LVELGDDWERTEVLHKKFEEFQEELTVRKGKVDRVNQYANACAQEKHPKLPEIKAKQDEV
NAAWDRLWSLAVKRRESLSNAADLQRFKRDINEAIQWMEEKKPLLTSEDYGKDLVSSEAL
FHNHKRLERNLAVMDDKVKELCAKADKLKISHPADASQIQQMEEELVSNWECIRELATNR
YAKLKASYGYHRFLSDYDELSGWMKEKIALINADELPTDVASGEALLARHQQHKHEIDSY
DDRFQSADATGQELLDGNHEASEEIREKMTILANEWAALLELWDKCQQQYRQCLDFHLFY
RDSEQVDSWMSRQEAFLENEDLGNSVGSVEALLQKHDDFEEAFTAQEEKIITLDETATKL
IDNDHYDSENIAAIRDGLLDRRDALRERAATRRKLLIDSLLLQQLYQDSDDLKTWINKKK
KLADDEDYKDVQNLKSRVQKQQDFEEELAANEIMLNNLEKTGQEMIEHAHYASDAVATRM
SEVANLWKELLEATAHKGTQLYEANQLVQFENTAEDLERWLEEVKWQVTSEDYGKGLADV
QNLLRKHGLLESAVTARQNQVDTLTDMATHFEEIGHPDSGDIRARQESLLSRFEALKEPL
AIRKKKLIDLLKLQQICRDSEDEEAWIQETEPSAASTHLGKDLVAAKNLLNRHEVILADM
ASHKPRIQVITERGNKMVEEGHFAAEDIASRVESLNKNMESLCARAIRRENDLKGNVQLQ
QYLADLHEAEAWIKEKEPIVDNRNYGADEEASGALLKKHEAFLVDLNAFENSIKALRDQA
EVCQQQQAAPVDEAGREARVIALYDFEARSRREISIKKNDVLTLLSSINKDWWKVEADDH
QGFVPAVYVRKLAHDELPGFPQQRQEEPVNIPQLQQQIETLYQSLLDRAEERRRRLLQRY
NEFLLAYEAGDMLEWIQEKKTENTGVELDDVWELQKKFDEFQRDLKSNEPRLKDINKVAD
ELLFEELLTPEGAHIRQELNTRWNSLKRLADEQYQLLSSAHAVEMFHREADDVKEQIDKK
CQALNAADPGSDLLSVQALQRQHEVFERDIIPLGEKVTTLGETAERLCESHPDATEDLQK
QRTELNEAWDTLQGLTNDRKESLNEAHKFFLFLSKASDLENWIKAIGGVISSPELAEDLT
GTEILLERHQEHHDDIKREDPTFQALEDFGTELIDGGHRNSHEIENTLEDIKLKREKLEK
AWEDRKKMLDQCLELQLFRGKCEQVESWMVARESSLRSDDRDHLNSLQALMKKRDDLNKA
ITAQEGKIADLENVATRLIDNDHYAKEEIGARLQRILDRWKALKEQLLAELGKLGDYADL
KQFYRDLEELEEWINEMLPIACDESYKDPTNIQRKYLKHQTFENEVNGRAEQVDGVINLG
KSLIERRVCDGDEENMQEQLDKLKENWDYLLERTTEKGQKLNEASRQQRFNTSIRDFEFW
LSEAEGLLAMKDQARDLTSAGNLLKKHQLLEAEMLAREDPLKDLNDLAKELISSGTFNID
QIEEKMNGVNERFKNVQSLAAAHHEKLKETYALFQFFQDLDDEESWIEEKLLRVSSQDYG
RDLQSVQNLLKKHKRLEGELVAHEPAVQNVLDTAESLRDKAAIGKEEIQERLAQFVQHWE
KLKELAKTRGLHLEESLQYLQFMENAEEEEAWLGEKDALVSRGDSGDTLAATQSLLKKHE
ALENDFAVHKNRVQDVCAQGEDILSKEETQNKDKISTKLQVLNEKTTSLAKALAAWKSQL
DDVHAFQQFNWKADMVESWIGEKEASLKTKSNGADLTAFLTLLAKHDTLDASLQSFQQER
LSEITDLKDQLVAAEHIQTKAIEERHAALLRRWEQLLEASRIHKQKLLEKQLPLQKAEDL
FMEFARKASAFNNWCENTEEDLSEPVHCVSLNEVRQLQKEHEAFLTSLAGAQEDFNHLLE
LDQQIKALNVPSSPYTWLTVDVLDRIWKHLPDIIKEREQELQKEEARQIKNFEMCQEFEQ
NASAFLQWIQETRAYFLDGSLLKETGTLESQLEANKRKQKEIQAMKRHLTKIEDLGDSME
EALILDIKYSTIGLAQQWDQLHQLGMRMQHNLEQQIQAKDTIGVSEETLKEFSTTYKHFD
ENLTGRLTHKEFRSCLRGLNYYLPMVEEGEPEPKFEKFLNAVDPGRKGYVSLEDYTSFLI
DKESENIKTSDDIESAFQALAEGKAYITKEDMKQALTPEQVSFCTIHMQQYMDPRGRSQP
AGYDYVGFTNSFFGN
NT seq
7248 nt
NT seq
+upstream
nt +downstream
nt
atggaaactccaaaggaagctgctgttgaaagcagtggaccaaaggttctagaaacagca
gaagaaatccagcagagacgacaagaggtgttagaccagtatcagaggttcaagaaacgg
gttgctgagaggggtcagaagcttgaagagtcttatcactatcaagttttcaggagagat
gcagatgacctggagaagtggatcatggaaaagcttgaaattacaagagataaaacatat
gaacccacaaatatacaggggaaatatcagaagcatgaatcctttgtatcagaggtacag
gccaaatcaagagtgcttcctgagctggaagaaatcagagaagctcgatttgcagaagac
cattttgcccatgaagacaccaagacccatctgaaggaacttcgccacctgtgggatctg
ctcttggagctgacccaagagaaaagtgatgtgctgctgcgggcactgaagttctatcaa
tactcgcaggattgtgaagacatcctggagtgggtaaaagaaaaggaagctatagtgaca
ctggtggagctgggcgatgactgggagagaactgaggtcctgcataagaagtttgaagaa
ttccaggaagaactgactgttcgaaagggaaaagtggatagagtgaaccaatatgctaat
gcatgtgcccaggagaaacatcctaagttgcctgagataaaggcaaaacaggatgaagtc
aatgctgcctgggatcgtctctggagcttggctgtcaagagacgagaaagtctgtcgaat
gccgcagacctccagcgatttaaaagggatatcaatgaagccatccagtggatggaagag
aagaagcctctactcacctctgaggactatggcaaagatcttgttagttctgaggcatta
tttcacaatcacaagaggcttgagaggaatcttgctgtcatggatgacaaggtgaaagag
ttatgtgccaaagcagacaagctgaagatttcccatcctgcagatgcatctcagatccag
cagatggaagaggaactagtctccaactgggagtgcatccgtgaactggccactaacaga
tacgcaaagctgaaggcttcttatgggtatcaccggttcttatcagactatgatgagctc
tcaggctggatgaaggaaaagattgctctgatcaatgctgatgagctaccaacagatgtg
gccagtggggaagccctgttagccaggcaccagcaacataaacacgagattgactcttat
gatgatcgatttcaatctgctgatgcaactggtcaagaactcctggatggcaatcatgaa
gcttctgaggaaattcgcgagaagatgacaatacttgctaatgagtgggctgccctgctg
gaactgtgggacaagtgtcagcaacagtaccgccaatgtctggatttccacctcttctac
cgagacagtgaacaagtggatagttggatgagcagacaagaggctttcctggaaaatgaa
gacctcggaaactcagtgggcagcgtggaagcccttcttcagaagcatgatgactttgaa
gaagccttcactgcccaggaagaaaagattataaccttggatgagaccgcgaccaagctg
attgacaatgaccactacgactctgagaacatagctgctatccgagatgggctcctggac
agacgtgatgccctgcgtgaaagggctgctactagaagaaaactgttaatagattcacta
cttctccaacaactgtatcaagactcagatgacctaaaaacctggatcaataagaagaaa
aagttggctgatgatgaagattacaaggatgtacagaacttgaagagccgagttcagaag
caacaggactttgaagaggaattggcagcgaatgagattatgctcaataacttggagaaa
actggccaagagatgattgagcatgctcattacgcctcggacgccgtagccactcgcatg
agtgaggttgccaacctctggaaggagttgctggaggcaacagcacataaagggactcag
ctgtatgaagctaaccagctggtacagtttgagaacactgcagaagacctagagcgttgg
ctagaggaggtgaagtggcaggttacctctgaggattatgggaaaggtctagctgatgta
cagaatctactaagaaaacatggccttctagagtcagctgtgactgctcgtcagaatcag
gtggacaccctcacagacatggctacacattttgaagaaataggccatcctgactctggg
gacatacgtgcaaggcaggaatccttgctttctcgttttgaggctctgaaagagccactg
gccattcggaagaagaaactcattgatctactcaagctacaacagatttgcagagactca
gaagatgaggaggcctggatccaggagactgaaccctcagcagcttctactcatcttggc
aaggacttggttgctgccaaaaatcttctaaacagacatgaagtcatcttggcagacatg
gccagccataaaccacggattcaagtcataacagagagaggaaacaaaatggtggaggaa
ggacactttgctgcagaagacatagcatctagagttgaaagcttgaacaaaaatatggag
tctctctgtgctcgagctattagacgggaaaatgatcttaaaggcaatgtccagctccaa
cagtacctggcagatctgcatgaagcagaagcatggattaaagagaaagaacccattgta
gacaacagaaactatggagctgatgaagaagcatctggggccctgctcaagaagcatgag
gccttcctggtggacctcaatgcatttgaaaacagcataaaggctctgagagatcaggca
gaagtctgccagcaacagcaggcagcaccagtggatgaggctggtcgagaagctagggtc
atagctttgtatgactttgaggctcgcagccgtagagagatcagcataaagaagaatgat
gtcttaactctgctcagttccatcaacaaggactggtggaaggttgaagctgatgatcac
caaggctttgtgccagcagtctatgtcaggaaactggcccatgatgaactaccagggttc
ccacagcaacggcaagaggagccagtcaacatccctcagctccagcaacagattgagacc
ctgtaccagtccctcctggatcgggcagaagaacgccgacgccgcttgctgcagcgttac
aatgagtttctgctggcctatgaggcaggagatatgttggagtggatccaagagaaaaag
acagaaaacactggggtggaactggatgatgtttgggaactgcagaagaagtttgacgag
ttccaacgggatctgaagagcaatgagccgcggctaaaggacatcaataaggtggctgat
gaactgctctttgaagagctcctcaccccagaaggagctcacatacgacaggagttaaac
acccgctggaattccttgaagaggctggcagatgaacagtatcagctgctcagcagtgca
catgctgttgagatgtttcacagagaagcagatgatgtcaaggaacagattgataagaaa
tgccaggctctcaatgctgccgaccctggctctgacctgctcagtgtccaggccctccag
aggcagcatgaggtctttgagagagacatcatccccctgggagaaaaggtgactacactg
ggggagacagctgagcgtctctgtgaatcacacccagatgccactgaggacctacagaag
cagcgaacagaactgaatgaggcctgggatacactacaaggtcttaccaatgatcgaaag
gagagtctgaatgaagcccataaattctttctcttccttagcaaggccagtgatctagag
aattggatcaaagccattggtggtgtaatatcatcgcctgagttggctgaggacttaact
ggcacagagatcttgctggagcgacatcaggagcatcatgatgacataaagagagaagac
cccactttccaggccttagaagactttggtacagaacttatagatggtggccaccgtaac
agccatgaaattgaaaatactctggaggatattaaattaaagagagaaaaattggaaaag
gcttgggaagaccgcaagaagatgctagaccagtgcttagaactgcagttgttccgaggg
aagtgtgaacaggtcgagagctggatggtggcacgtgagagttccctgaggtcagacgac
agagatcacttaaacagtcttcaggctttgatgaagaaacgggatgatttgaacaaagca
atcactgcccaggaagggaagattgctgacctagagaacgttgccacaaggctcatagac
aatgaccactatgccaaggaagagattggtgctcgcctccaacgcatcctagacaggtgg
aaggctctcaaagaacagctgcttgctgaactgggaaagttaggagattatgctgacctg
aaacagttctatcgtgacctcgaggagctggaggaatggatcaatgagatgctgcccata
gcctgtgatgaatcttacaaagaccccactaatattcagaggaaatatttgaaacatcaa
acctttgaaaatgaagtcaatggtcgtgctgagcaggtggatggggtcattaaccttggg
aagtccctgattgagcgcagagtgtgtgatggggatgaagagaacatgcaggagcaactg
gacaagctaaaggagaactgggattatctcctagaaagaacaactgaaaaagggcagaag
ctcaatgaggccagtcggcagcaaaggttcaacacaagcatccgggactttgagttctgg
ctttcagaggcagaaggcttgttggccatgaaagatcaggccagggacttaacttcagca
ggaaacctacttaagaagcatcagctattggaagcagagatgttggcacgagaggaccct
ctcaaagatctgaatgatctggctaaggagctgatctccagtgggactttcaacattgac
cagatagaagaaaaaatgaatggtgtcaacgagcgcttcaaaaatgtccagagcttggca
gctgcacaccatgagaaactgaaagagacctatgccttgttccagttcttccaagacctt
gatgatgaggaatcctggatagaggagaagttgttgcgagtgagctctcaggactatggg
agggatcttcagagtgttcagaacttactgaaaaaacacaaacgcctagagggggagctg
gtagcacatgaacctgctgtccagaatgtgctggatacagccgaaagcctgagagataag
gctgctatagggaaagaggagatccaggagcggctggctcagtttgtccaacactgggaa
aagctcaaagagttggcaaagacccgagggttgcatttggaggagtctcttcagtatctt
caattcatggagaatgcagaggaagaggaagcatggctgggtgaaaaggatgctctggtc
agccgaggggattctggagacacactggctgctactcagagtttgctaaagaagcatgaa
gctttggagaatgactttgctgtacacaagaaccgggtacaagatgtttgtgcacaagga
gaagacattcttagtaaggaagaaactcaaaacaaggataagatttccaccaagctccaa
gttctgaatgaaaagacaacctctctagccaaggcattagctgcttggaagtcacaattg
gatgatgtgcatgcctttcaacagtttaactggaaggcggacatggtggaatcctggata
ggtgagaaggaagcaagcctgaagaccaagagcaatggtgcagacctcactgccttcctc
acactcctggcaaagcatgacaccctggatgccagtcttcagagcttccagcaagaaagg
ctttctgaaatcactgatctgaaagaccagctggtggctgctgaacacatccaaaccaaa
gccattgaggagcgccatgcagccttgctgaggcgctgggaacaactgctggaggcatct
agaattcacaagcagaaactactagagaagcagctgcctctacagaaggctgaggatcta
ttcatggaatttgcacgcaaagcttcagccttcaacaactggtgtgagaacactgaagag
gacttgtcagaacctgttcattgtgtttctctgaatgaggtccggcagctgcagaaggaa
catgaagccttcttgacctctctggctggggctcaagaggattttaaccatttgttagag
ctagaccagcaaattaaagccttaaatgtgccctccagtccttacacctggttaacagtg
gatgtactggacaggatctggaagcacttgcctgacatcataaaggaaagggaacaggag
ctacagaaagaagaggctaggcagatcaagaactttgaaatgtgtcaggagtttgaacag
aatgccagtgcctttcttcagtggatccaggagaccagggcttattttctggatggatca
ttgctcaaagaaacaggaactctggaatcccaacttgaagcaaataaaaggaagcagaaa
gagatccaggcaatgaagcgtcatctgaccaagattgaagacctgggggacagcatggaa
gaggctctgatccttgacatcaaatacagcaccattggactggcccagcaatgggatcag
ctgcaccagctgggaatgcgaatgcaacacaatttggagcaacagatacaagccaaagac
accataggtgtgagtgaggagacactgaaagaatttagcaccacatacaaacacttcgat
gagaatctgacagggagattgactcacaaagagttccgttcatgcctgagaggactcaat
tactatttgcctatggtagaggaaggtgaacctgaacccaagtttgagaagttcctgaat
gctgtggatccagggaggaaaggatatgtctcactggaggactacacatcattcctgatt
gacaaggagtcagagaatatcaagaccagtgatgacatagagagtgcattccaagccctg
gcagaaggcaaggcttatattaccaaggaggacatgaaacaggctctcaccccggaacaa
gtgtcattctgcaccatacatatgcagcaatatatggacccacggggtcggagccaacct
gctggctatgactatgttggcttcaccaattcattctttggcaattga
DBGET
integrated database retrieval system
