Arvicanthis niloticus (African grass rat): 117721989
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Entry
117721989 CDS
T08817
Symbol
Sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
anu01009
]
117721989 (Sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117721989 (Sh3rf1)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117721989 (Sh3rf1)
Protein phosphatases and associated proteins [BR:
anu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117721989 (Sh3rf1)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117721989 (Sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
zf-Nse
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
117721989
NCBI-ProteinID:
XP_034376782
EnsemblRapid:
ENSANLG00005016712
LinkDB
All DBs
Position
16:51087208..51247092
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AA seq
893 aa
AA seq
DB search
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGV
DELPSNILLVRLLDGIKQRPWKPGPGGGGGTTCTNALRAQGSTLVNCGSKDLQSSQCGQQ
PRVQAWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGVH
GFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEG
MLADKIGIFPISYVEFNSAAKQLIEWDKPPVPGVDTAECPSATAQSSSASKHSDTKKNTR
KRHSFTSLTMANKSSQASQHRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQVHIS
TTGLIVTPPPSSPVTTGPSFTFPSDVPYQAALGTMNPPLPPPPLLAATVLASTPSGATAA
AVAAAAAAAAATGMGPRPVVGSTDQIAHLRPQTRPSVYVAIYPYTPRKEDELELRKGEMF
LVFERCQDGWYKGTSMHTSKIGVFPGNYVAPVTRAVTNASQAKVPMSTAGQTSRGVTMVS
PSTAGGLTQKPQGNGVAGNPSVVPTAVVSAAHIQTSPQAKVLLHMTGQMTVNQARNAVRT
VAAHNQERPTAAVTPIQVQNAACLGPASVGLPHHSLASQPLPPMAGPAAHVAAVSINRTN
APLACAAGVSLASPNLTTATLENEPSGRTLTILPGLPTSPESAASACGNSSAVKPDKDSK
KEKKGLLKLLSGASTKRKPRVSPPASPTLDVELGTGEVPLQGAVGPELPLGGGHGRVGSC
PTDGDGPLAAGTAALAQEAFHRKTSSLDSAVPIAPPPRQACSSLGPVMNEARPVVCERHR
VVVSYPPQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctgccttgctggaccttctggagtgccccgtgtgtctagaacgcttggat
gcttctgcaaaggtcctaccttgccagcatacattttgcaaacgatgtttgctggggatt
gtgggttcccggaatgaactcagatgtcccgaatgcaggactcttgttggctccggggta
gatgagctccccagtaacattctactggtcagacttctggatggtatcaagcagaggcct
tggaaacccggccccggtgggggcggcgggaccacctgcacaaacgcattaagggcacag
ggcagcactctggttaattgtggctcaaaagatctgcagagctcccagtgtggacagcag
cctcgggtgcaagcctggagccccccagtgaggggaatacctcagttaccgtgtgccaaa
gcattatataactacgaaggaaaagaacctggagaccttaagttcagcaaaggcgacatc
atcattttgcgccgacaagtggatgaaaattggtaccacggggaagtcaacggggtccac
ggctttttccccaccaactttgtgcagatcatcaaacctttacctcagcccccgcctcag
tgcaaagcactttatgactttgaagtgaaagacaaggaagctgacaaagattgccttccc
tttgcaaaggacgacgtactgaccgtgatccgcagagtagacgaaaactgggctgaggga
atgctggcagataaaataggaatatttccaatttcatacgttgagtttaactcagctgcc
aagcaactgatagagtgggataagcctcccgtgccaggagtggacacggcagaatgcccc
tccgcgacagcacagagcagctctgcctcaaagcactccgacaccaagaagaacaccagg
aagcgacactccttcacctccctcaccatggccaacaagtcttcccaggcgtcccagcac
cgccactccatggagatcagccctcctgtgctcatcagctccagcaaccccacagccgca
gcccgcatcagcgaactgtctgggctctcctgcagcgccccgtctcaggttcatataagc
accactgggttaattgtgaccccaccccctagcagcccagtgacaactggcccttcgttc
actttcccgtcagatgtcccctaccaagctgcccttggaactatgaatcctcctcttcct
ccaccgcctctcctggctgccactgtactggcctccaccccgtcaggcgctactgctgct
gctgttgctgctgccgccgctgctgccgccgccactggaatgggacccaggcctgtggtg
ggatccactgaccagattgcacatttacggcctcagactcgtcccagtgtatacgttgct
atatatccatacactccccggaaggaagatgagctggagctgaggaaaggggagatgttc
ttggtgtttgagcgttgccaggatggttggtacaaagggacatccatgcacaccagcaag
ataggtgtcttccctggcaactatgtggctcccgtcacaagggcggtgacaaatgcctcc
caagctaaagtccctatgtctactgcgggtcagacaagtcgcggggtgaccatggtcagt
ccctccactgctggagggcttacacagaagccccaaggaaatggtgtggctgggaatccc
agcgttgtccccacagctgtggtgtcagcagctcatatccagacaagtcctcaggcaaag
gtcctgctgcacatgactgggcagatgacagtcaaccaggcccgcaacgctgtgaggaca
gttgcagcacataaccaggaacgccccacggcagcagtgactcccatccaggtccagaat
gctgcctgcctcggtcctgcatccgtgggcctgccccatcattctctggcctcccaacct
ctgcctccaatggcaggccctgccgcccatgttgctgccgtcagcatcaatcgaaccaat
gcccccctggcctgcgctgcaggggtttctctggcctccccaaatttgaccactgccact
ttggagaacgagcccagtggtcgaacactgaccatcctccctggactccccacgtctcct
gagagtgctgcatcagcgtgtgggaacagttcagctgtgaaaccagacaaggacagtaag
aaagaaaaaaagggcctactgaagctgctttctggcgcctccaccaaacgcaagccccga
gtctcccctccagcatcacctaccctggacgtggagctgggtacgggggaggttcccttg
cagggagcagtgggtcctgagttgccgctagggggcggccacggcagagtggggtcctgc
cccacagatggggatggtcccctggccgctgggacagcagccttagcccaggaggctttc
catcgcaagacaagctccctggactccgcagtgcccatcgctccaccacctcgccaagcc
tgctcctccctgggtccagtcatgaatgaggccaggcctgttgtctgtgaaaggcacagg
gtggtggtttcctaccctcctcagagtgaggcagaacttgaactcaaagaaggagatatt
gtgtttgttcataagaaacgagaggatggctggttcaaaggcacgttgcaaagaaatggg
aagactggccttttcccagggagctttgtggaaaacatctga
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