Arvicanthis niloticus (African grass rat): 117722045
Help
Entry
117722045 CDS
T08817
Symbol
Slamf1
Name
(RefSeq) signaling lymphocytic activation molecule
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
anu04517
IgSF CAM signaling
anu05162
Measles
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117722045 (Slamf1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117722045 (Slamf1)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
117722045 (Slamf1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117722045 (Slamf1)
04090 CD molecules [BR:
anu04090
]
117722045 (Slamf1)
Cell adhesion molecules [BR:
anu04515
]
Immunoglobulin superfamily
SLAM/CD2 family
117722045 (Slamf1)
CD molecules [BR:
anu04090
]
Proteins
117722045 (Slamf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLAM
Ig_3
I-set
Ig_2
ig
DUF3377
Receptor_2B4
DUF5737
DC_STAMP
Motif
Other DBs
NCBI-GeneID:
117722045
NCBI-ProteinID:
XP_034376875
LinkDB
All DBs
Position
16:62127995..62159510
Genome browser
AA seq
342 aa
AA seq
DB search
MDPNRSLSLRILLFLSLAFELSYGTGGGVMDCPLIIQKLGSDTWLPLINEHQINELVNKS
IRILVTMATSPGSTTNKKIVSFDLSKGGYPDHLEDGYQFQSKNLSLGILGTRRESEGLYF
VNVEENVSVQQFCMQLKLYEQVSTPEIKVLNKTQENENGTCSLLLACTVKEGDHVAYSWS
DEAGTRLLSQANSSHLLHIRLSNQHQDSIYSCTVSNPVSSRSKIVNLWQEECRPEVSESS
SWIPYTVAPCVVIIIIILVSTAIIVVKRQGKPNHCQPPVEEKSLTIYAQVQKSGPQEKKL
HDALTDQDPCTTIYVAATEPAPESVQEFNPTTVYASVTLPES
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaacagatccctttccttgagaatacttctgtttctctccctggcttttgag
ttgagctacggaacaggtggaggtgtgatggattgcccactgattatccagaagctggga
agtgacacatggctgcccctgataaatgaacatcagataaatgagcttgtgaacaaaagc
atccgcatccttgtcacgatggcaacatctccaggaagcacaaccaacaagaaaatagtg
tcttttgatctctctaaagggggctacccagaccacctggaggatggctaccagtttcaa
tcaaaaaacctgagcttggggatcctggggaccaggcgggagagtgaaggattgtacttt
gtgaacgtggaggagaacgtgtcagttcagcaattctgcatgcagctgaagctttatgag
caggtctccactccagagattaaagtgctaaacaaaacccaggagaatgagaatgggact
tgcagcttgctgttagcctgcacggtgaaggaaggggatcatgtggcttacagctggagt
gatgaggctggcacccgcctgctgagccaagccaactcctcccacctcctgcacatcagg
cttagcaaccagcatcaagacagcatctacagctgcactgtaagcaatcctgtcagcagt
cgctctaagatcgtcaacctatggcaagaagaatgcaggccagaagtctcagaatcgagt
tcatggataccatatactgttgccccatgtgtggtcattataatcatcatcctggtttcc
acggcaataatagtggtgaaaagacaaggtaaaccaaatcactgccagccaccagtagaa
gaaaaaagccttaccatttatgcgcaagtacagaaatcaggacctcaagagaagaaactt
catgatgccctgacagatcaggacccctgcacgaccatttacgtggctgccacagagcct
gccccagagtctgtccaggaatttaaccccaccacagtttatgccagtgtgacactgcca
gagagctga
DBGET
integrated database retrieval system
